[2026-06-01T21:51:38.314519Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:51:38.315100Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:51:38.315110Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:51:38.315115Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:51:38.315119Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXsBjDaj'
[2026-06-01T21:51:38.315123Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:51:38.315127Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:51:38.315131Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:51:38.315134Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-01T21:51:38.315138Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:51:38.315142Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:51:38.315146Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:51:38.315153Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:51:38.315157Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:51:38.315815Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:51:38.315936Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:51:38.321756Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:51:38.322400Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:51:38.322645Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:51:38.322902Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:51:38.323174Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.324157Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.324290Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.324580Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.324940Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.325062Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.325331Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.326198Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.326393Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.327969Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.328904Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:51:38.329243Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.329617Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.329792Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330114Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330186Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330305Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330370Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330495Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330582Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330783Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330851Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.330963Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.331040Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.331387Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.331695Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.331862Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.331969Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.332132Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.332251Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.332454Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.332560Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.332757Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.332888Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.333205Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.333593Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.333714Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.333782Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.333890Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.333959Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.334070Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.334131Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.334247Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.334318Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.334464Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.334573Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.334884Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335327Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335451Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335516Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335624Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335693Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335816Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335879Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.335988Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.336051Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.336160Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.336225Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.336853Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.337474Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.337596Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.337658Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.337771Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.337836Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.337946Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.338015Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.338122Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.338185Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.338295Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.338359Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.338464Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.338624Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.339856Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.339981Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.341704Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.342637Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.342792Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.342870Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.342987Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.343055Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.343174Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.343241Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.343406Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.343474Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.343595Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.343667Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.344588Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345212Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345326Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345396Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345509Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345576Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345686Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345750Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345863Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.345925Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.346040Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.346103Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.359248Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.359358Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.359441Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.359700Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.359775Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.359889Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.359958Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.360091Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.360162Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:38.360223Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:51:38.364375Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.365170Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.365455Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.365885Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.366703Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.367997Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.368886Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.369907Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.371088Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.374911Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-01T21:51:38.379345Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-01T21:51:38.382313Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-01T21:51:38.390262Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-01T21:51:38.392225Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-01T21:51:38.396368Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-01T21:51:38.397165Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-01T21:51:38.489916Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.491008Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.494208Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-01T21:51:38.507330Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.508281Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:38.512342Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-01T21:51:39.075403Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.076512Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.080250Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-01T21:51:39.840139Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-01T21:51:39.843041Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.843116Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.843140Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.844138Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.844521Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.845093Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.848447Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-01T21:51:39.851416Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-01T21:51:39.852226Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-01T21:51:39.911630Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.912745Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.916138Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-01T21:51:39.920786Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.921861Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.925585Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-01T21:51:39.986679Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.987782Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:39.991546Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-01T21:51:40.020630Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.020724Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.021763Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.022150Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.026364Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-01T21:51:40.027022Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-01T21:51:40.054650Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.055763Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.059256Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-01T21:51:40.088361Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.089419Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.092569Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-01T21:51:40.121947Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.123018Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.126020Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-01T21:51:40.139068Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.140046Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.144020Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-01T21:51:40.172796Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.173810Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.177552Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-01T21:51:40.288580Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.289652Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.292921Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-01T21:51:40.293544Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.294304Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.297973Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-01T21:51:40.359159Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.360223Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.363544Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-01T21:51:40.474910Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.475003Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.476002Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.476698Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.481109Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-01T21:51:40.482074Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-01T21:51:40.542030Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.542115Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.543113Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.543466Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.548512Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-01T21:51:40.549868Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-01T21:51:40.609532Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.610588Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.614962Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-01T21:51:40.876553Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.877629Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.880698Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-01T21:51:40.942020Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.943080Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.946279Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-01T21:51:40.959231Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.960215Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.963310Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-01T21:51:40.992199Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.993163Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.997767Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-01T21:51:40.998102Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:40.998919Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.002223Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-01T21:51:41.063721Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.064703Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.068247Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-01T21:51:41.129275Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.130241Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.133380Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-01T21:51:41.194537Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.195509Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.199298Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-01T21:51:41.611005Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.611937Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.614899Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-01T21:51:41.676145Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.677218Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.680869Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-01T21:51:41.742129Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.743055Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.747298Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-01T21:51:41.858234Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.859171Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.862361Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-01T21:51:41.923857Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.923939Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.924820Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.925189Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.929186Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-01T21:51:41.930551Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-01T21:51:41.990030Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.990957Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.994182Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-01T21:51:41.998862Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999551Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.002389Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-01T21:51:42.031895Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.032754Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.035556Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-01T21:51:42.064905Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.065780Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.068738Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-01T21:51:42.130035Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.131083Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.134667Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-01T21:51:42.295899Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.297035Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.300430Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-01T21:51:42.361421Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.362267Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.365738Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-01T21:51:42.426862Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.427699Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.430944Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-01T21:51:42.492105Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.492955Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.496708Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-01T21:51:42.808351Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.809359Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.812862Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-01T21:51:42.874180Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.875056Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.878450Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-01T21:51:42.939170Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.940002Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.943249Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-01T21:51:43.054628Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.054726Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.055519Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.055935Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.059557Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-01T21:51:43.060840Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-01T21:51:43.120600Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.120679Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.120708Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.121443Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.121739Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.122209Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.126447Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-01T21:51:43.128146Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-01T21:51:43.129300Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-01T21:51:43.187526Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.188322Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.191488Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-01T21:51:43.302855Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.303743Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.307487Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-01T21:51:43.336341Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.337201Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.340462Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-01T21:51:43.345028Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.345681Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.348895Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-01T21:51:43.377881Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.378620Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.381944Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-01T21:51:43.382743Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.383645Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.384065Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.385120Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.388217Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-01T21:51:43.435295Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-01T21:51:43.449911Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.450014Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.450040Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.450781Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.451319Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.451838Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.456248Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-01T21:51:43.457845Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-01T21:51:43.458844Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-01T21:51:43.486949Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.487808Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.488437Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.491004Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.491849Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-01T21:51:43.494875Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-01T21:51:43.555693Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.555777Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.556484Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.557061Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.561826Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-01T21:51:43.562594Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-01T21:51:43.622085Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.622208Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.622924Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.623341Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.627357Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-01T21:51:43.628331Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-01T21:51:43.688305Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.688415Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.689213Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.689783Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.693395Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-01T21:51:43.694584Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-01T21:51:43.754527Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.755222Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.759177Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-01T21:51:43.820051Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.820126Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.820682Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.821336Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.825540Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-01T21:51:43.827476Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-01T21:51:43.886453Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.886562Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.887206Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.887607Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.891281Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-01T21:51:43.892338Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-01T21:51:43.952343Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.952968Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.956302Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-01T21:51:44.017375Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.018034Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.021644Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-01T21:51:44.133231Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.133930Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.137302Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-01T21:51:44.166489Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.167124Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.170049Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-01T21:51:44.231726Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.897949Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.898687Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.902508Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-01T21:51:44.963761Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.995967Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.996676Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.000288Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-01T21:51:45.062756Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.678631Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.679269Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.682888Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-01T21:51:45.744052Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.808518Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.809139Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.812305Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-01T21:51:45.842701Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.957149Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.957730Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.961241Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-01T21:51:46.022570Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.022679Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.023254Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.027293Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-01T21:51:46.088142Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.152665Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.153267Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.157225Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-01T21:51:46.218422Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.218849Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.219059Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.219763Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.220370Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.226084Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:51:46.227733Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:51:46.228463Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:51:46.284986Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.285064Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.285090Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.285390Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.285754Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.290314Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:51:46.291614Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:51:46.351283Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.351362Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.351615Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.355094Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:51:46.416669Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.887491Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:51:57.203841Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:51:57.203841Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] 
[2026-06-01T21:51:57.203841Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-01T21:51:57.203932Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] 
[2026-06-01T21:51:57.203940Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:51:57.203947Z] [nf-a0aaa71e551a234943d02a82abc17544-a9863-ltg2x] [632_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec