File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/1e/c5c87bb4ac6c6a6fde78735884761d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ir1eo57s because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-01 21:56:56,856 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-01 21:56:57,677 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-01 21:56:57,845 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-01 21:56:58,772 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-01 21:56:58,937 - cnv_pipe.batch.run_model - INFO - Processing cluster 1107 with 185 probes
2026-06-01 21:56:59,326 - cnv_pipe.batch.run_model.cluster1107 - INFO - Child process started for cluster 1107 with 185 probes
2026-06-01 21:57:53,305 - cnv_pipe.batch.run_model.cluster1107 - INFO - Child process finished cluster 1107. Wrote cluster_1107_samples.csv and cluster_1107_params.csv
2026-06-01 21:57:53,306 - cnv_pipe.batch.run_model - INFO - Cluster 1107 finished in 54.37 seconds. Status: SUCCESS