[2026-06-01T21:51:47.298040Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:51:47.298876Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:51:47.298889Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:51:47.298893Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:51:47.298897Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX8glz6N'
[2026-06-01T21:51:47.298901Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:51:47.298907Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:51:47.298911Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:51:47.298915Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-01T21:51:47.298918Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:51:47.298922Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:51:47.298926Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:51:47.298929Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:51:47.298933Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:51:47.299696Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:51:47.299902Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:51:47.306447Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:51:47.307837Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:51:47.308109Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:51:47.308329Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:51:47.308735Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.309505Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.309659Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.309772Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.309943Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.310035Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.310698Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.310878Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.311135Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.311873Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.312275Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.312546Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.312728Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.315245Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.315617Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:51:47.315940Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.316306Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.316515Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.316968Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317040Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317252Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317323Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317440Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317507Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317616Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317680Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317795Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.317861Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.318191Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.318550Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.318670Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.318743Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.318863Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.318925Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319036Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319099Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319212Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319278Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319394Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319462Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319618Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.319761Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.320121Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.320613Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321069Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321137Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321252Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321374Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321495Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321563Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321672Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321738Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321849Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.321912Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322034Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322096Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322207Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322273Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322379Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322442Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322582Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322648Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.322851Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.323049Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.324211Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.324988Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.325230Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.325334Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.326318Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.326967Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.327220Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.327290Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.327408Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.327473Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.329604Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.329828Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.330292Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.330865Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.331119Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.331779Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.332704Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.332792Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.332941Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.333008Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.333142Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.333214Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.333423Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.333502Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.333755Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.333963Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.334865Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.335563Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.335679Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.335750Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.335862Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.335925Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.336039Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.336102Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.347207Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.354095Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.354828Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.355216Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.355490Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.356248Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.356851Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.357360Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.357976Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.358483Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.358960Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.359591Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.360629Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.361140Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.361752Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.362409Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.364636Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.371506Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-01T21:51:47.372168Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-01T21:51:47.376389Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-01T21:51:47.381820Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:51:47.385393Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:51:47.388578Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-01T21:51:47.392620Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-01T21:51:47.394323Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:47.396055Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:51:47.396700Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-01T21:51:47.511835Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.512118Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.513132Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.513601Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.521171Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:51:47.523593Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-01T21:51:47.582464Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.583672Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.589497Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-01T21:51:48.050987Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.052183Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.056377Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:51:48.167485Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.168616Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.172132Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-01T21:51:48.433943Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.435017Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.439703Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-01T21:51:48.550262Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.551493Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.555784Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-01T21:51:48.867314Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.868490Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.872714Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-01T21:51:48.933821Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.934895Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.939609Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:51:48.999861Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.000973Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.004850Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-01T21:51:49.567615Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.567731Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.568830Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.569215Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.572840Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-01T21:51:49.574096Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-01T21:51:49.634004Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.635132Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.638967Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:51:49.643414Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.644195Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.647504Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-01T21:51:49.708600Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.708697Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.709735Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.710113Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.713687Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-01T21:51:49.714809Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:51:49.774918Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.775021Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.776028Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.776369Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.780243Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:51:49.781368Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-01T21:51:49.842784Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.842892Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.843920Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.844314Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.848117Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-01T21:51:49.849343Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-01T21:51:49.909066Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.910159Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.914043Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-01T21:51:49.975344Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.976347Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.979822Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:51:50.040870Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.041973Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.045310Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-01T21:51:50.206967Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.207974Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.211482Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-01T21:51:50.272623Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.273666Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.277635Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-01T21:51:50.338589Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.338698Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.339670Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.340072Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.344944Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-01T21:51:50.345190Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-01T21:51:51.308536Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.309516Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.313136Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-01T21:51:51.374283Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.374397Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.375339Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.375749Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.380012Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:51:51.380952Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:51:51.441452Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.441556Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.441582Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.442464Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.442874Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.443486Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.446964Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:51:51.448096Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:51:51.452174Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-01T21:51:51.510519Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.510635Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.510672Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.511568Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.512091Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.512560Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.517826Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:51:51.518131Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-01T21:51:51.521233Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:51:51.578408Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.579441Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.583472Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-01T21:51:51.583739Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.584437Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.588369Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-01T21:51:52.000030Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.000988Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.004616Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-01T21:51:52.065778Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.066851Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.070399Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-01T21:51:52.382633Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.382752Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.383520Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.383915Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.387535Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-01T21:51:52.388642Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:51:52.448407Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.448512Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.449309Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.449821Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.453412Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-01T21:51:52.455043Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:51:52.514666Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.514768Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.515568Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.516069Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.520459Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:51:52.521223Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-01T21:51:52.581542Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.582404Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.585623Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-01T21:51:52.590387Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.591144Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.594580Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:51:52.655565Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.656505Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.659519Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-01T21:51:52.664505Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.665351Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.668997Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:51:52.697903Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.699078Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.699583Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.702108Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.702784Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-01T21:51:52.705556Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-01T21:51:52.766672Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.767618Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.772834Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-01T21:51:53.084114Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.084935Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.088855Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:51:53.117271Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.117353Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.118099Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.118460Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.122309Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:51:53.123317Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-01T21:51:53.126960Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.127027Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.127743Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.128103Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.131321Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-01T21:51:53.131811Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:51:53.160913Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.160988Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.161672Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.161964Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.166861Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:51:53.167346Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-01T21:51:53.167414Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.168076Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.171024Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-01T21:51:53.183865Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.184519Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.187693Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:51:53.248806Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.249540Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.253059Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-01T21:51:53.314154Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.314945Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.318454Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-01T21:51:53.429866Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.430634Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.434600Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:51:53.495705Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.496483Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.500267Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:51:53.561312Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.562056Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.565364Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:51:53.627044Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.627772Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.631330Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-01T21:51:53.742962Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.743712Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.747885Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-01T21:51:53.809465Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.810215Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.813345Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-01T21:51:53.874457Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.875193Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.879372Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-01T21:51:53.990425Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.991231Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.994707Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:51:54.055751Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.056430Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.060114Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-01T21:51:54.221863Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.222614Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.225229Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.226027Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.226509Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-01T21:51:54.229962Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-01T21:51:54.258851Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.260038Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.260607Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.260711Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.263337Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.263747Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.264224Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-01T21:51:54.268147Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-01T21:51:54.269020Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-01T21:51:54.297737Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.298358Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.301257Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.302001Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-01T21:51:54.302439Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.303087Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.305352Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.306436Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-01T21:51:54.309686Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:51:54.338570Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.338630Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.339163Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.342373Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-01T21:51:54.371566Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.372144Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.375571Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:51:54.376139Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.408143Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.923503Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.924089Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.928031Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-01T21:51:54.988957Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.989044Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.989610Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.992992Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-01T21:51:55.054116Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.054762Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.058381Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-01T21:51:55.119243Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.434228Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.434828Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.438127Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:51:55.499208Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.268077Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.268596Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.271791Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-01T21:51:56.332751Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.049969Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.050524Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.053762Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-01T21:52:02.114604Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.114876Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.114995Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.115428Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.115719Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.119814Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:52:02.121283Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:52:02.122411Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:52:02.148753Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.148813Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.149144Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.149701Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.150781Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.154062Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:52:02.155519Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:52:02.184334Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.185823Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.186023Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.188687Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:52:02.218135Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.291106Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:52:20.418559Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:52:20.418559Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] 
[2026-06-01T21:52:20.418559Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-01T21:52:20.418662Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] 
[2026-06-01T21:52:20.418670Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:52:20.418677Z] [nf-572a5e5780d18595da5f5c2e8606d774-36dcc-7knc8] [616_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec