cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:161000001, elapsed 0.0s, est remaining 0.7s, peak mem 111MB, user 0.2s, sys 0.5s, output queue size 17
progress 10% @chr2:76000001, elapsed 0.1s, est remaining 0.6s, peak mem 111MB, user 0.5s, sys 1.2s, output queue size 5
progress 15% @chr2:236000001, elapsed 0.1s, est remaining 0.6s, peak mem 111MB, user 1.0s, sys 1.7s, output queue size 4
progress 20% @chr3:152000001, elapsed 0.1s, est remaining 0.5s, peak mem 111MB, user 1.2s, sys 2.5s, output queue size 13
progress 25% @chr4:113000001, elapsed 0.2s, est remaining 0.5s, peak mem 111MB, user 1.5s, sys 3.1s, output queue size 2
progress 30% @chr5:85000001, elapsed 0.2s, est remaining 0.5s, peak mem 111MB, user 2.0s, sys 3.6s, output queue size 2
progress 35% @chr6:63000001, elapsed 0.2s, est remaining 0.4s, peak mem 111MB, user 2.3s, sys 4.2s, output queue size 2
progress 40% @chr7:55000001, elapsed 0.3s, est remaining 0.4s, peak mem 111MB, user 2.4s, sys 5.1s, output queue size 15
progress 45% @chr8:57000001, elapsed 0.3s, est remaining 0.4s, peak mem 114MB, user 2.8s, sys 5.7s, output queue size 1
progress 50% @chr9:72000001, elapsed 0.3s, est remaining 0.3s, peak mem 114MB, user 2.9s, sys 6.5s, output queue size 1
progress 55% @chr10:93000001, elapsed 0.4s, est remaining 0.3s, peak mem 114MB, user 3.2s, sys 7.2s, output queue size 2
progress 60% @chr11:123000001, elapsed 0.4s, est remaining 0.3s, peak mem 114MB, user 3.3s, sys 8.0s, output queue size 5
progress 65% @chr13:15000001, elapsed 0.4s, est remaining 0.2s, peak mem 114MB, user 3.4s, sys 8.9s, output queue size 9
progress 70% @chr14:62000001, elapsed 0.4s, est remaining 0.2s, peak mem 114MB, user 3.7s, sys 9.5s, output queue size 1
progress 75% @chr16:12000001, elapsed 0.5s, est remaining 0.2s, peak mem 114MB, user 4.0s, sys 10.2s, output queue size 1
progress 80% @chr18:4000001, elapsed 0.5s, est remaining 0.1s, peak mem 114MB, user 4.4s, sys 10.8s, output queue size 17
progress 85% @chr20:22000001, elapsed 0.5s, est remaining 0.1s, peak mem 114MB, user 4.9s, sys 11.3s, output queue size 14
progress 90% @chrX:39000001, elapsed 0.6s, est remaining 0.1s, peak mem 132MB, user 5.4s, sys 11.7s, output queue size 114
progress 95% @chrY:36000001, elapsed 0.6s, est remaining 0.0s, peak mem 141MB, user 6.0s, sys 12.3s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.2s, est remaining 0.0s, peak mem 168MB, user 7.6s, sys 13.3s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.83
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 384
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813900
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.231 user 6.602 sys 8.262 real
done: 1 calls 0.010 user 0.000 sys 0.012 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.004 user 0.002 sys 1.184 real
idle: 80 calls 0.014 user 0.009 sys 45.537 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 176316416 mem 8.171 user 13.959 sys 2.670 real