mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_7lxh65y because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-01 21:53:50,433 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-01 21:53:51,317 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-01 21:53:51,492 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-01 21:53:52,497 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-01 21:53:52,664 - cnv_pipe.batch.run_model - INFO - Processing cluster 107 with 162 probes
2026-06-01 21:53:53,034 - cnv_pipe.batch.run_model.cluster107 - INFO - Child process started for cluster 107 with 162 probes
2026-06-01 21:54:46,498 - cnv_pipe.batch.run_model.cluster107 - INFO - Child process finished cluster 107. Wrote cluster_107_samples.csv and cluster_107_params.csv
2026-06-01 21:54:46,500 - cnv_pipe.batch.run_model - INFO - Cluster 107 finished in 53.84 seconds. Status: SUCCESS