File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/023359cd9fce0b3b245d6638141175/.command.err
Size
53.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr16_25246607-25247490.bed)
Attempt

Content

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[2026-06-01T21:51:45.076719Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:51:45.077921Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:51:45.077945Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:51:45.077952Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:51:45.077958Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXQpR85N'
[2026-06-01T21:51:45.077964Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:51:45.077973Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:51:45.077978Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:51:45.077983Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] memMb: 1015785
[2026-06-01T21:51:45.077989Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:51:45.077994Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:51:45.077999Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:51:45.078004Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:51:45.078010Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:51:45.078787Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:51:45.078869Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:51:45.086956Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:51:45.088241Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:51:45.088458Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:51:45.089073Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:51:45.089311Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.090666Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.091264Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.092946Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.093593Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.093846Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:51:45.094285Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.094506Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.094947Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.095057Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.095237Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.095331Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.095532Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.095631Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.095810Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.095912Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.096197Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.096550Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.096711Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.096809Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.097052Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.097143Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.097303Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.097403Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.097583Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.097758Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.098227Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.098330Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.098492Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.098594Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.098783Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.098937Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.099112Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.099219Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.099550Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.099984Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.100153Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.100255Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.100417Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.100513Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.100677Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.100773Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.100943Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.101174Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.101720Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.101826Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.101997Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.102196Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.102380Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.102490Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.102784Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.103423Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.103654Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.103784Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.104008Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.104111Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.123917Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.124133Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.124251Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.124472Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.124604Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.124740Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.124841Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.124991Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.125085Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:45.125156Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:51:45.126244Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.127068Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.127573Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.127953Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.129121Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.130397Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.133374Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.141948Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-01T21:51:45.142816Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-01T21:51:45.143143Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.145361Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-01T21:51:45.146208Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-01T21:51:45.151115Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.151351Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-01T21:51:45.155677Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-01T21:51:45.266800Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.267706Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.272834Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-01T21:51:45.383364Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.384268Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.387882Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-01T21:51:46.803228Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.804145Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.807703Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-01T21:51:46.837287Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.838144Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.841943Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-01T21:51:46.871454Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.872342Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.875504Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-01T21:51:46.928782Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-01T21:51:46.936421Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.936509Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.936541Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.937323Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.937797Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.939878Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.940853Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-01T21:51:46.943135Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-01T21:51:46.944055Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-01T21:51:47.004721Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.004828Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.005582Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.006513Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.009916Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-01T21:51:47.011294Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-01T21:51:47.624471Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.625317Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.628968Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-01T21:51:48.091083Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.092427Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.095563Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-01T21:51:48.156713Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.158030Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.161086Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-01T21:51:48.222378Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.223642Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.226900Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-01T21:51:48.639224Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.640059Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.643552Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-01T21:51:48.822875Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-01T21:51:48.855259Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.855384Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.856147Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.856814Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.860560Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-01T21:51:48.861815Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-01T21:51:48.923391Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.923485Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.924227Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.924645Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.928588Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-01T21:51:48.929145Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.929923Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.930308Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-01T21:51:48.933299Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-01T21:51:48.995111Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.995252Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.996317Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.996968Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.001095Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-01T21:51:49.002444Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-01T21:51:49.112093Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.113797Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.116305Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.117565Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-01T21:51:49.118021Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.121399Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-01T21:51:49.182432Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.183680Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.186948Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-01T21:51:49.248053Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.249219Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.253012Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-01T21:51:49.363850Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.365027Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.368017Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-01T21:51:49.429165Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.430242Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.433618Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-01T21:51:49.745191Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.745917Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.749060Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-01T21:51:49.810211Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.810908Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.814101Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-01T21:51:50.477380Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.478001Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.481112Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-01T21:51:50.542321Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.543334Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.547030Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-01T21:51:50.607718Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.608741Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.612069Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-01T21:51:50.641103Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.642152Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.645350Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-01T21:51:50.706236Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.706885Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.710064Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-01T21:51:50.771465Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.772058Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.775220Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-01T21:51:50.886704Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.887345Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.890462Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-01T21:51:51.352593Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.353246Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.356397Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-01T21:51:51.417612Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.418260Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.421465Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-01T21:51:51.482833Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.483432Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.486405Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-01T21:51:51.547726Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.712168Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.712731Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.715428Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-01T21:51:51.744904Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.745444Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.748275Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-01T21:51:51.748794Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.813043Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.845046Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.845582Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.848650Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-01T21:51:51.909928Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.024149Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.024666Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.027529Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-01T21:51:52.056678Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.774904Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.775385Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.778155Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-01T21:51:53.839869Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.054188Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.054703Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.057510Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-01T21:51:54.118739Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.934831Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.935298Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.937889Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-01T21:51:54.967221Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.967468Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.967586Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.968171Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.968582Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.970508Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:51:54.972615Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:51:54.973901Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:51:55.002010Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.002077Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.002106Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.002338Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.002618Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.005428Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:51:55.005859Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:51:55.034965Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.035038Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.035258Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.037644Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:51:55.067302Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.682478Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:52:03.967543Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:52:03.967543Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] 
[2026-06-01T21:52:03.967543Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-01T21:52:03.967615Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] 
[2026-06-01T21:52:03.967624Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:52:03.967632Z] [nf-ce023359cd9fce0b3b245d6638141175-0fc8d-xzbsd] [550_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec