Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8b/d6cb69888dfc6f6564c5bf685a4908/negative_somatic_control_1.snv_indel.phased.vep.vcf.gz
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/6733a42cfc7c2b32f2797886d65762/.command.sh
Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/6733a42cfc7c2b32f2797886d65762/.command.run
Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
==> STAGING COMPLETE (4 inputs)
Loaded 73 hotspot definitions
Processed 144 variants, labeled 0 as HOTSPOT