Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/81a0bbd77c18e74eacd36ee2826f96/HCC1395_tumor.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/61f7f85ccb8ccf9ab540617df2465b/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5c/81a0bbd77c18e74eacd36ee2826f96/HCC1395_tumor.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr20_14085521-14085828.bed.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8d/61f7f85ccb8ccf9ab540617df2465b/.command.run
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-01T21:51:41.972162Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:51:41.982122Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:51:41.982165Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:51:41.982173Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:51:41.982178Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX0Rokng'
[2026-06-01T21:51:41.982183Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:51:41.982192Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:51:41.982196Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:51:41.982220Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-01T21:51:41.982225Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:51:41.982229Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:51:41.982233Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:51:41.982236Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:51:41.982241Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:51:41.983058Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:51:41.983259Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:51:41.990197Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:51:41.991194Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:51:41.991474Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:51:41.991710Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:51:41.992011Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.992461Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.992552Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.992626Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.992745Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.992812Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.992932Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.992994Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.993156Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.993269Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.993973Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.994118Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:41.994297Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.994549Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.995056Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.995694Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.997308Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.997907Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:51:41.998488Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.998590Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.998812Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.998883Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999070Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999141Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999413Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999689Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999812Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999876Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:41.999988Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.000059Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.000170Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.000241Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.000378Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.000441Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.000560Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.000623Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.001549Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.001935Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.002606Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.002676Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.002797Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.002863Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.002977Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.003047Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.003155Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.003218Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.003331Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.003395Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.003727Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004203Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004317Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004383Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004491Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004553Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004664Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004727Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004838Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.004902Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.005010Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.005074Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.005184Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.005390Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.006015Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.006087Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.006196Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.006282Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.006398Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.006462Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.007420Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.007966Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.008121Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.008188Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.008303Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.008368Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.009878Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.010532Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.010668Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.010743Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.010861Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.010928Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.011045Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.011112Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.011227Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.011293Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.011409Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.011485Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.011773Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.012355Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.012473Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.012537Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.012649Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.012716Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.012827Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.012889Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.013004Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.013066Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.013179Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.013243Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.029924Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.030510Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.030725Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.031064Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.032101Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.032225Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.032470Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.032590Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.032659Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.033129Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.033401Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.033838Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:42.034166Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.034459Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:51:42.035415Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.036602Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.039174Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.039682Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-01T21:51:42.040993Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.042043Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.044635Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-01T21:51:42.049182Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-01T21:51:42.052020Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-01T21:51:42.056521Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-01T21:51:42.060139Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-01T21:51:42.064414Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:51:42.176250Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.177173Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.181041Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:51:42.241850Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.242875Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.245700Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:51:42.307307Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.308436Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.311675Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:51:42.849893Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-01T21:51:42.874210Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.875331Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.879009Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:51:42.939812Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.940802Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:42.944736Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:51:43.055834Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.056886Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.060196Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-01T21:51:43.073155Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.073228Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.074061Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.074373Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.078261Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-01T21:51:43.079471Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-01T21:51:43.139363Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.140524Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.144217Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-01T21:51:43.205240Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.206377Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.209651Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-01T21:51:43.321094Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.322117Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.325265Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:51:43.386737Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.387805Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.391525Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:51:43.452737Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.453822Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.457289Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:51:43.568898Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.570034Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.573792Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:51:43.634975Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.635995Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.639648Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:51:43.700410Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.701429Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.704912Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-01T21:51:43.766186Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.767244Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.770777Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-01T21:51:43.882074Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.883118Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.886358Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-01T21:51:43.947679Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.947788Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.948877Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.949370Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:43.953031Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:51:43.954686Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-01T21:51:44.014446Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.014522Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.015439Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.015839Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.019662Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:51:44.020739Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-01T21:51:44.080813Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.081828Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.085085Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-01T21:51:44.246762Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.247843Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:44.251221Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-01T21:51:45.014896Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.015850Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.020024Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-01T21:51:45.432005Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.433058Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.436674Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:51:45.465852Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.466797Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.470534Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-01T21:51:45.471341Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.472099Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.475243Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:51:45.536416Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.536527Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.537471Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.537964Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.543325Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-01T21:51:45.544508Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-01T21:51:45.604205Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.605176Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.609626Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-01T21:51:45.870965Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.871889Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.875662Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-01T21:51:45.937396Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.938432Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:45.942006Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-01T21:51:46.003522Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.004470Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.007769Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-01T21:51:46.021104Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.022009Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.025828Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-01T21:51:46.087120Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.088329Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.092660Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:51:46.097291Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.098182Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.101534Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:51:46.162796Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.162902Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.164072Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.164602Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.168524Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-01T21:51:46.169836Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-01T21:51:46.229375Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.230614Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.233305Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.234885Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-01T21:51:46.235004Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.238236Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-01T21:51:46.299413Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.300623Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.304524Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:51:46.305075Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.306131Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.309482Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-01T21:51:46.370701Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.371844Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.375454Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:51:46.436299Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.436405Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.436443Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.437436Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.438059Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.438702Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.443401Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-01T21:51:46.445187Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-01T21:51:46.446449Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:51:46.504930Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.505211Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.505244Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.505276Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.505989Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.506379Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.506887Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.509202Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.512042Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-01T21:51:46.512490Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:51:46.515774Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-01T21:51:46.516896Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-01T21:51:46.548617Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.548684Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.548714Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.548732Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.549350Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.550057Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.550640Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.551683Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.558075Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-01T21:51:46.560099Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-01T21:51:46.562830Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:51:46.564486Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:51:46.619119Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.619209Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.619272Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.620046Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.620495Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.620748Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.628747Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-01T21:51:46.631110Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-01T21:51:46.631992Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-01T21:51:46.888092Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.888939Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.892817Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-01T21:51:46.953908Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.954781Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-01T21:51:46.958181Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-01T21:51:47.019365Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.020126Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.024468Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-01T21:51:47.085394Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.086230Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.090861Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:51:47.151356Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.152050Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.155627Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-01T21:51:47.267000Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.267795Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.272294Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-01T21:51:47.333302Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.334097Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.338237Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-01T21:51:47.449591Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.450402Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.454067Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-01T21:51:47.515370Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.516368Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.520879Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:51:47.581538Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.582238Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:47.586223Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-01T21:51:48.349490Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.350443Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.354633Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-01T21:51:48.415555Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.416541Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.421322Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:51:48.532316Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.533238Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.537585Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:51:48.598416Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.599195Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.603192Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-01T21:51:48.865084Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.865858Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.869659Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-01T21:51:48.930833Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.931770Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.935458Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:51:48.996717Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.996836Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.997668Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.998179Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.003084Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:51:49.004186Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-01T21:51:49.063424Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.063544Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.063596Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.064373Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.064866Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.065374Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.069902Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-01T21:51:49.072281Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-01T21:51:49.072843Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-01T21:51:49.130761Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.130862Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.130887Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.131614Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.132018Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.135526Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.136163Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:51:49.140972Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-01T21:51:49.142277Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-01T21:51:49.203410Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.203534Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.204263Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.207654Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:51:49.269267Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.384014Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.384678Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.388556Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:51:49.449707Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.614645Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.615382Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.619236Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-01T21:51:49.680513Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.146443Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.147283Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.151798Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-01T21:51:50.212222Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.326920Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.327752Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.331640Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-01T21:51:50.392791Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.161658Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.162442Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.166579Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-01T21:51:52.227545Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.002361Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.002987Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.006450Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-01T21:51:56.067461Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.067800Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.067964Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.068542Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.071368Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.071941Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:51:56.075299Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:51:56.076432Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:51:56.104609Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.104672Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.104699Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.104928Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.105654Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.109444Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:51:56.110734Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:51:56.140123Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.140187Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.140388Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.143611Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:51:56.172998Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.997707Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:52:15.102269Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:52:15.102269Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] 
[2026-06-01T21:52:15.102269Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-01T21:52:15.102383Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] 
[2026-06-01T21:52:15.102393Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:52:15.102402Z] [nf-8d61f7f85ccb8ccf9ab540617df2465b-93d05-qlqss] [605_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec