[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUCof8P/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUCof8P/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXUCof8P/chr6_138229684-138229952.bed.gz.tbi
[2026-06-01T21:51:48.355580Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:51:48.356433Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:51:48.356490Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:51:48.356511Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:51:48.356524Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXUCof8P'
[2026-06-01T21:51:48.356533Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:51:48.356544Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:51:48.356555Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:51:48.356564Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-01T21:51:48.356612Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:51:48.356624Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:51:48.356631Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:51:48.356638Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:51:48.356653Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:51:48.357756Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:51:48.357887Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:51:48.364297Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:51:48.365303Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:51:48.365687Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:51:48.366163Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:51:48.366668Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.368211Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.370404Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.371168Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.371281Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.371681Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:51:48.371879Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.372031Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.372181Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.372468Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.373057Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.373229Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.373414Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.373490Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.373691Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.373763Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.373984Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.374282Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.374406Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.374471Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.374712Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.374786Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.374901Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.374978Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.375095Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.375158Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.375276Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.375341Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.375472Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.375686Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376153Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376251Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376383Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376448Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376560Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376660Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376795Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376863Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.376977Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.377042Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.377216Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.377424Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.377839Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.377907Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378020Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378088Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378203Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378324Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378443Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378507Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378636Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.378700Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.379241Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.379535Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.379661Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.379726Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.379842Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.379920Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.380037Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.380101Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.380222Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.380283Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.380400Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.380464Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.380679Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381260Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381383Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381446Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381559Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381625Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381740Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381806Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381915Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.381980Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.383928Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.384941Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.385155Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.385237Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.385364Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.385433Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.385552Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.385615Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.385913Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.386696Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.386863Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.386940Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.387065Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.387150Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.387273Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.387423Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.387575Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.387903Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.388607Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.388681Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.388794Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.388863Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.388986Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389048Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389163Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389229Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389409Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389509Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.389842Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.390736Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.390915Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.390992Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.391109Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.391177Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.391293Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.391358Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.393922Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.394950Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.395281Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.395353Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.410013Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.410805Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.411996Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.412204Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.412371Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.413122Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.413895Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.414601Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.415376Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.415963Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.416994Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.417882Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.418934Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.419430Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.420655Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.421962Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.423476Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.427692Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:48.428550Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-01T21:51:48.430593Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:51:48.434539Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-01T21:51:48.440572Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-01T21:51:48.444576Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-01T21:51:48.448926Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-01T21:51:48.457679Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-01T21:51:48.458298Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-01T21:51:48.458596Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-01T21:51:48.573892Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.573991Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.574026Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.575185Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.575979Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.577185Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:48.582940Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-01T21:51:48.588170Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-01T21:51:48.588842Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-01T21:51:49.497057Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.498295Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.501562Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-01T21:51:49.563298Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.564666Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.568831Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-01T21:51:49.780328Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.781580Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:49.785569Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-01T21:51:50.197392Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.198706Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.203020Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-01T21:51:50.313711Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.315001Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.318572Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-01T21:51:50.380059Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.381389Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.384990Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-01T21:51:50.446237Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.446343Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.447714Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.448116Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.452300Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-01T21:51:50.453321Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-01T21:51:50.513591Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.513701Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.514942Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.515274Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.519183Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-01T21:51:50.520883Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-01T21:51:50.580309Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.581582Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.585501Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-01T21:51:50.614335Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.615646Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.619526Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-01T21:51:50.680408Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.681548Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.685343Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-01T21:51:50.746294Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.747692Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:50.751633Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-01T21:51:51.013179Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.014462Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.018418Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-01T21:51:51.079168Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.079273Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.080403Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.080982Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.085352Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-01T21:51:51.086460Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-01T21:51:51.145846Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.147256Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.151323Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-01T21:51:51.155855Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.156794Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.160463Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-01T21:51:51.672812Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.674028Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.677516Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-01T21:51:51.738792Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.739999Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.743570Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-01T21:51:51.772437Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.773608Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.777653Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-01T21:51:51.806285Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.806409Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.807624Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.808324Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.812162Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-01T21:51:51.840944Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.842091Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.845440Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-01T21:51:51.847683Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-01T21:51:51.850191Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.850270Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.851223Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.851533Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.854954Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-01T21:51:51.856040Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-01T21:51:51.884205Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.885292Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.890473Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-01T21:51:51.951360Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.951457Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.952526Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.952979Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:51.957465Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-01T21:51:51.959240Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-01T21:51:52.018350Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.018470Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.019557Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.020310Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.025132Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-01T21:51:52.026338Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-01T21:51:52.088448Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.089562Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.093750Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-01T21:51:52.154275Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.155448Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.159031Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-01T21:51:52.220781Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.222084Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.225790Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-01T21:51:52.286752Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.287985Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.292317Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-01T21:51:52.352603Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.352722Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.353812Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.354145Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.358728Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-01T21:51:52.359444Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-01T21:51:52.419687Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.420744Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.424063Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-01T21:51:52.485977Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.487381Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:52.492941Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-01T21:51:53.004849Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.006092Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.009817Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-01T21:51:53.070765Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.071994Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.075588Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-01T21:51:53.136537Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.138147Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.141593Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-01T21:51:53.202969Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.204107Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.207746Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-01T21:51:53.268721Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.269828Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.273545Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-01T21:51:53.285766Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.286954Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.290207Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-01T21:51:53.303152Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.304123Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.307214Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-01T21:51:53.311893Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.312757Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.315701Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-01T21:51:53.344857Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.345066Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.345986Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.346327Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.351828Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-01T21:51:53.353015Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-01T21:51:53.382856Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.383745Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.386800Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-01T21:51:53.448233Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.448311Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.449153Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.449459Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.454852Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-01T21:51:53.456194Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-01T21:51:53.517844Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.518831Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.522437Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-01T21:51:53.583410Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.584443Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.587760Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-01T21:51:53.949952Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.951069Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:53.955411Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-01T21:51:54.015811Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.016935Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.020686Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-01T21:51:54.033221Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.034143Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.037629Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-01T21:51:54.098722Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.098803Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.099637Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.099981Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.104853Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-01T21:51:54.105424Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-01T21:51:54.165897Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.167066Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.170455Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-01T21:51:54.332028Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.333033Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.336218Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-01T21:51:54.349012Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.349793Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.352580Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-01T21:51:54.381790Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.382658Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.386525Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-01T21:51:54.399185Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.400021Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.403356Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-01T21:51:54.464359Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.465236Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.469041Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-01T21:51:54.481471Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.482325Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.485344Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-01T21:51:54.546618Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.547503Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.551291Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-01T21:51:54.612400Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.612495Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.613346Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.613726Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.617256Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-01T21:51:54.619249Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-01T21:51:54.678550Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.679888Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.680168Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.682688Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.683724Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-01T21:51:54.686139Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-01T21:51:54.747358Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.747449Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.748223Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.748566Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.752270Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-01T21:51:54.753779Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-01T21:51:54.813318Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.814157Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.818030Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-01T21:51:54.878800Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.879622Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.882926Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-01T21:51:54.943953Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.944790Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:54.949640Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-01T21:51:55.210383Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.211245Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.214828Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-01T21:51:55.275640Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.275754Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.276451Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.276827Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.280751Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-01T21:51:55.281443Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-01T21:51:55.341492Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.341586Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.342317Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.342659Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.347328Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-01T21:51:55.347520Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-01T21:51:55.457386Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.458139Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.461487Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-01T21:51:55.522559Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.522660Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.523368Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.523761Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.527500Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-01T21:51:55.528786Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-01T21:51:55.590007Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.590102Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.590803Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.591126Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.594919Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-01T21:51:55.595360Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-01T21:51:55.655870Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.655971Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.656713Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.657428Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.661464Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-01T21:51:55.662240Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-01T21:51:55.771911Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.772641Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.775692Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-01T21:51:55.836896Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.837578Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.841282Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-01T21:51:55.902232Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.902948Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:55.906989Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-01T21:51:56.017533Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.018192Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.021875Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-01T21:51:56.083398Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.084023Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.086957Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-01T21:51:56.115965Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.116554Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.117435Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.117986Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.121671Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-01T21:51:56.123029Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-01T21:51:56.150336Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.150962Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.155000Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.155181Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-01T21:51:56.155254Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.163140Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.163637Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.166845Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-01T21:51:56.195734Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.199633Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.207537Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.207988Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.211088Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-01T21:51:56.239921Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.404232Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.404723Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.408123Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-01T21:51:56.469273Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.683928Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.684496Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.687868Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-01T21:51:56.748707Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.913047Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.913572Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.916242Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-01T21:51:56.945503Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.945804Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.945929Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.946491Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.946982Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.953718Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:51:56.955489Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:51:56.956658Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:51:56.980111Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.980390Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.983097Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:51:56.984082Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.984131Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.984326Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:51:56.987803Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:51:57.016775Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:57.016834Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:57.017026Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:57.019999Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:51:57.049389Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.017522Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:52:07.245618Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:52:07.245618Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] 
[2026-06-01T21:52:07.245618Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-01T21:52:07.245698Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] 
[2026-06-01T21:52:07.245704Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:52:07.245711Z] [nf-af25366bd3a59219f31738030c0f9bbc-82c49-ckdfg] [648_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec