.command.err - Workdir - DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr4_22420786-22421189.bed)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/8f/74007a98f781fa343476d3c49c0379/.command.err
Size: 85.8 KB
Task: DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr4_22420786-22421189.bed)
Attempt
Content

[2026-06-01T21:51:59.348780Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-01T21:51:59.349607Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-01T21:51:59.349630Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-01T21:51:59.349634Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-01T21:51:59.349659Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXyBJ0dz'
[2026-06-01T21:51:59.349668Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-01T21:51:59.349675Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-01T21:51:59.349678Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-01T21:51:59.349682Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-01T21:51:59.349686Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-01T21:51:59.349691Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-01T21:51:59.349694Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-01T21:51:59.349699Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-01T21:51:59.349703Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-01T21:51:59.350457Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-01T21:51:59.350536Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-01T21:51:59.356957Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-01T21:51:59.357814Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-01T21:51:59.358428Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-01T21:51:59.358632Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-01T21:51:59.358916Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.359385Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.359490Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.359620Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.359761Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.359832Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.359952Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.360132Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.360685Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.361231Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.363772Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.364331Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-01T21:51:59.364571Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.364770Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.364936Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365008Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365124Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365193Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365312Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365375Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365553Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365625Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365744Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.365812Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.366055Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.366463Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.366624Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.366694Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.366811Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.366879Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.366994Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.367107Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.367228Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.367292Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.367453Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.367717Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.367999Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.368414Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.368775Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.369103Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.369279Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.369345Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.369489Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.369726Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.369858Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.369924Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.370039Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.370158Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.370721Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371085Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371199Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371267Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371377Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371440Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371552Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371620Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371730Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371797Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.371942Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.372029Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.372457Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.372979Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373140Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373234Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373376Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373480Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373616Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373682Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373804Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.373872Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.374202Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.374886Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.375097Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.375176Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.377188Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.377518Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.378381Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.378906Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379031Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379098Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379210Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379274Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379387Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379450Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379645Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379738Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.379853Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.380008Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.380437Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.381035Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.381237Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.381427Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.382301Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.382965Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.383089Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.383151Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.396600Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.402148Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.402749Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.402981Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.403189Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.404133Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.404258Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.404748Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.404845Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.405455Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.406079Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.406461Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.407313Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.408051Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.408458Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.409204Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-01T21:51:59.410063Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.410707Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-01T21:51:59.416800Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0008] Task initiated on local node
[2026-06-01T21:51:59.423226Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:51:59.423772Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-01T21:51:59.429008Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0013] Task initiated on local node
[2026-06-01T21:51:59.432324Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-01T21:51:59.439534Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0011] Task initiated on local node
[2026-06-01T21:51:59.451964Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0015] Task initiated on local node
[2026-06-01T21:51:59.457428Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:51:59.458139Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0003] Task initiated on local node
[2026-06-01T21:52:00.625452Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.626579Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.630829Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-01T21:52:00.942557Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.944014Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.948455Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:52:00.977112Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.978179Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:00.982696Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-01T21:52:01.595277Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.595411Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.596565Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.597139Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.601157Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0008] Task initiated on local node
[2026-06-01T21:52:01.602384Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0012] Task initiated on local node
[2026-06-01T21:52:01.662196Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.663790Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.667461Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:52:01.929328Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.929443Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.930638Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.930989Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.934963Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0013] Task initiated on local node
[2026-06-01T21:52:01.936722Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0011] Task initiated on local node
[2026-06-01T21:52:01.996443Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.996552Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.997624Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:01.998175Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.002870Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0014] Task initiated on local node
[2026-06-01T21:52:02.003924Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0005] Task initiated on local node
[2026-06-01T21:52:02.064310Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.065430Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.069056Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0006] Task initiated on local node
[2026-06-01T21:52:02.330973Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.332057Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.335940Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:52:02.447339Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.448487Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.452544Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0010] Task initiated on local node
[2026-06-01T21:52:02.481612Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.482725Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.486212Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-01T21:52:02.547488Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.548617Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:02.552904Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-01T21:52:03.316457Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.316553Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.317478Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.317804Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.321979Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-01T21:52:03.323215Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0002] Task initiated on local node
[2026-06-01T21:52:03.383102Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.384063Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.387751Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0000] Task initiated on local node
[2026-06-01T21:52:03.599608Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.600712Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.604700Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0005] Task initiated on local node
[2026-06-01T21:52:03.665225Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.665346Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.666619Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.667162Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.671269Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0010] Task initiated on local node
[2026-06-01T21:52:03.672538Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-01T21:52:03.732173Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.733150Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.737414Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-01T21:52:03.798094Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.799493Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.803414Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0003] Task initiated on local node
[2026-06-01T21:52:03.864319Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.865383Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.869130Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-01T21:52:03.930226Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.931280Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.935072Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-01T21:52:03.963887Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.965347Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.965728Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.968556Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.969407Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0015] Task initiated on local node
[2026-06-01T21:52:03.972378Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0001] Task initiated on local node
[2026-06-01T21:52:03.973145Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.973885Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:52:03.976900Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-01T21:52:04.005939Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.006928Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.010294Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-01T21:52:04.010864Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.011553Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.015277Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0012] Task initiated on local node
[2026-06-01T21:52:04.076735Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.076888Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.077802Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.078143Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.082094Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-01T21:52:04.083485Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:52:04.143430Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.143542Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.144507Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.144932Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.149441Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0007] Task initiated on local node
[2026-06-01T21:52:04.150596Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:52:04.610883Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.611911Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.616163Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-01T21:52:04.677057Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.677171Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.678216Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.678882Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.682702Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0006] Task initiated on local node
[2026-06-01T21:52:04.683898Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-01T21:52:04.711520Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.712497Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.716179Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0000] Task initiated on local node
[2026-06-01T21:52:04.716662Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.717421Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.720199Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:52:04.781588Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.782636Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.786242Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-01T21:52:04.815088Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.816086Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.819134Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-01T21:52:04.880492Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.880572Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.880623Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.881516Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.881880Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.882373Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.885776Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0001] Task initiated on local node
[2026-06-01T21:52:04.888961Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-01T21:52:04.889702Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-01T21:52:04.949231Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.960327Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.961330Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.961751Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:04.965210Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0014] Task initiated on local node
[2026-06-01T21:52:04.966531Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-01T21:52:05.026771Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0014' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.026886Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.027758Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.028106Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.032394Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:52:05.033303Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0009] Task initiated on local node
[2026-06-01T21:52:05.896151Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.897084Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.900598Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0002] Task initiated on local node
[2026-06-01T21:52:05.961432Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0002' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.961528Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.962267Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.962727Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:05.966323Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-01T21:52:05.967631Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:52:06.027775Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.028699Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.032337Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_004_chr5_0004] Task initiated on local node
[2026-06-01T21:52:06.144453Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.145306Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.148633Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:52:06.310296Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.311186Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.314820Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:52:06.376125Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.376262Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.377108Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.377430Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.381558Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:52:06.382768Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:52:06.844472Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.845400Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.848867Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:52:06.960214Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.960303Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.960329Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.961204Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.961508Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.961837Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:06.966246Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-01T21:52:06.968830Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0004] Task initiated on local node
[2026-06-01T21:52:06.970348Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:52:07.027165Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.027253Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.027976Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.028466Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.032957Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-01T21:52:07.034066Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-01T21:52:07.144098Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.144946Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.148486Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-01T21:52:07.209936Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.210741Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.214191Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:52:07.275841Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.276624Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.279665Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-01T21:52:07.340971Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.341058Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.341671Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.342003Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.345639Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-01T21:52:07.346600Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0007] Task initiated on local node
[2026-06-01T21:52:07.358586Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.359273Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.361981Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-01T21:52:07.391298Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.391385Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.391968Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.392367Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.393351Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.395929Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.396465Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-01T21:52:07.399287Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-01T21:52:07.401238Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-01T21:52:07.462086Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.462150Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.462762Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.463353Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.467256Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-01T21:52:07.468100Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_004_chr5_0009] Task initiated on local node
[2026-06-01T21:52:07.497415Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.498055Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.501178Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-01T21:52:07.501810Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_004_chr5_0009' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.502472Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.505243Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-01T21:52:07.534394Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.535023Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.538204Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-01T21:52:07.539261Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.539887Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.542585Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:52:07.572014Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.572663Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.575817Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-01T21:52:07.605218Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.605854Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.608848Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-01T21:52:07.613893Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.614452Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.617471Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-01T21:52:07.646516Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.650162Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.650582Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.653395Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-01T21:52:07.715196Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.929770Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.930319Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-01T21:52:07.933226Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-01T21:52:07.994715Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.209286Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.209890Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.212781Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-01T21:52:08.225902Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.226384Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.229375Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-01T21:52:08.242352Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.242838Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.245349Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-01T21:52:08.246492Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.262303Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.278274Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.342262Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.342693Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-01T21:52:08.345659Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-01T21:52:08.406973Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.273087Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.273565Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.276393Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-01T21:52:09.305572Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.305847Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.305970Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.306297Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.306610Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.311507Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-01T21:52:09.312612Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-01T21:52:09.313696Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-01T21:52:09.339468Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.340221Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.340280Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.340495Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.340845Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.343532Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-01T21:52:09.344600Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-01T21:52:09.373765Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.373840Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.374013Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-01T21:52:09.376404Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-01T21:52:09.406878Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-01T21:52:10.022099Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-01T21:52:18.238423Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-01T21:52:18.238423Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] 
[2026-06-01T21:52:18.238423Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-01T21:52:18.238517Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] 
[2026-06-01T21:52:18.238525Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-01T21:52:18.238533Z] [nf-8f74007a98f781fa343476d3c49c0379-34105-zqp9d] [606_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec