[2026-06-03T20:58:13.421736Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T20:58:13.425857Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T20:58:13.425882Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T20:58:13.425887Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T20:58:13.425892Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXYWlWeG'
[2026-06-03T20:58:13.425896Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T20:58:13.425900Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T20:58:13.425904Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T20:58:13.425908Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T20:58:13.425911Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T20:58:13.425915Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T20:58:13.425919Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T20:58:13.425922Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T20:58:13.425926Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T20:58:13.426294Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T20:58:13.426393Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T20:58:13.432187Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T20:58:13.432841Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T20:58:13.433093Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T20:58:13.433541Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T20:58:13.433842Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.434592Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.434686Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.434759Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.434901Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.435139Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.435531Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.436526Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.436697Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.436947Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.437244Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.438996Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.439713Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T20:58:13.439817Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.440155Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.440465Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.440599Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.440670Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.440784Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.440848Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.441076Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.441173Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.441301Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.441371Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.441506Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.441750Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442152Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442219Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442332Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442402Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442509Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442613Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442730Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442794Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442902Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.442968Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.443078Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.443318Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.443679Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.443741Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.443852Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.443915Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444029Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444095Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444202Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444264Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444376Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444490Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444607Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.444733Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445272Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445341Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445449Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445512Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445619Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445679Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445789Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445853Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.445960Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.446021Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.446132Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.446193Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.446399Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.446999Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447111Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447178Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447287Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447347Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447455Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447519Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447627Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447695Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447799Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.447863Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.449214Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.449830Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.449957Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450027Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450141Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450207Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450324Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450385Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450505Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450567Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450674Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450767Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.450968Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.451814Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.451942Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452009Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452123Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452190Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452298Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452365Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452478Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452539Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452651Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.452712Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.469546Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.470050Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.470270Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.470444Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.471576Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.471684Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.471879Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.472204Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.472360Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.472701Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.473373Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.473631Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.474421Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.474968Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.476178Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.477022Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.477563Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.478443Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.479641Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T20:58:13.484170Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-03T20:58:13.485012Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:13.487450Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-03T20:58:13.490579Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-03T20:58:13.494084Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-03T20:58:13.495596Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-03T20:58:13.497519Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-03T20:58:13.498295Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-03T20:58:13.561492Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.562424Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.565486Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-03T20:58:14.177959Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.179130Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.182072Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-03T20:58:14.294806Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.295878Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.299003Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-03T20:58:14.410374Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.411482Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.414673Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-03T20:58:14.526066Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.526151Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.527041Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.527343Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.531274Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:14.793025Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.793097Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.794064Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.794359Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.797945Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-03T20:58:14.851299Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-03T20:58:14.859309Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.859366Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.860285Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.860725Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.863404Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-03T20:58:14.864587Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-03T20:58:14.892916Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.893167Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.893198Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.894037Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.894345Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.894695Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.899548Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-03T20:58:14.902117Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:14.903021Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-03T20:58:14.966407Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.967372Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.970139Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-03T20:58:15.031296Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.032180Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.035033Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-03T20:58:15.048086Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.049300Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.052043Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-03T20:58:15.081265Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.082174Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.084809Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-03T20:58:15.085789Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.086492Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.088952Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-03T20:58:15.150638Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.151654Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.154496Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-03T20:58:15.667084Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.668083Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.671381Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-03T20:58:15.700640Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.701647Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.704754Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:15.765934Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.766852Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.769801Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-03T20:58:15.798956Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.799893Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.802760Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-03T20:58:15.964348Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.965336Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.968724Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-03T20:58:15.997469Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.998391Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.001288Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-03T20:58:16.162772Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.163735Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.166856Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-03T20:58:16.228454Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.229331Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.232191Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:16.261382Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.261456Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.262245Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.262739Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.265763Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-03T20:58:16.266489Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-03T20:58:16.294870Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.296133Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.296655Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.298106Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.300638Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-03T20:58:16.302027Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-03T20:58:16.315400Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.316140Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.318573Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-03T20:58:16.332178Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.332924Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.335469Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-03T20:58:16.339517Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-03T20:58:16.340829Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.340895Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.340929Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.341678Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.341968Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.342525Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.345271Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:16.346676Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-03T20:58:16.347113Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.348056Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-03T20:58:16.348182Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.350699Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-03T20:58:16.351677Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.352310Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.355098Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-03T20:58:16.368221Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.368927Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.371267Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:16.372486Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.373106Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.375410Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-03T20:58:16.376792Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.376855Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.377501Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.377776Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.380506Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-03T20:58:16.407275Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-03T20:58:16.410367Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.410439Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.411100Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.411922Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.413883Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-03T20:58:16.416032Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:16.421308Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.421973Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.424104Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:16.437778Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.438431Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.440864Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-03T20:58:16.441945Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.442521Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.445204Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-03T20:58:16.450503Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.451165Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.453626Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:16.483059Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.483125Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.483751Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.484435Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.487230Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-03T20:58:16.488347Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-03T20:58:16.500579Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.501315Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.503862Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-03T20:58:16.517006Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.517745Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.520000Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:16.549549Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.549618Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.550213Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.550620Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.553445Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-03T20:58:16.554517Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-03T20:58:16.558339Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.558880Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.561267Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-03T20:58:16.590826Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.591550Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.594186Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:16.655649Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.655721Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.656370Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.657020Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.659777Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-03T20:58:16.660858Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-03T20:58:16.690513Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.691265Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.693878Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-03T20:58:16.723197Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.723826Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.726895Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-03T20:58:16.755840Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.755909Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.756543Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.758291Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.760093Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-03T20:58:16.761169Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-03T20:58:16.790862Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.791583Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.794001Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-03T20:58:16.855762Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.856444Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.859076Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-03T20:58:16.888395Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.889103Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.891773Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:16.953350Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.954037Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.956750Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-03T20:58:16.986112Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.986762Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.989308Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-03T20:58:16.994497Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.995086Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.997709Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:17.059138Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.059786Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.062805Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-03T20:58:17.091738Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.092343Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.095263Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-03T20:58:17.507564Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.508220Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.511646Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-03T20:58:17.622807Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.622895Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.623492Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.624046Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.627156Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-03T20:58:17.628348Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-03T20:58:17.655926Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.656099Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.656767Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.656937Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.657540Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.659490Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-03T20:58:17.661098Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.662675Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-03T20:58:17.663448Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-03T20:58:17.693336Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.693393Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.693869Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.694189Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.696851Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-03T20:58:17.697350Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:17.726080Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.726137Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.726610Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.726844Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.729394Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-03T20:58:17.730365Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:17.759575Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.759635Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.760111Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.760410Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.763120Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-03T20:58:17.764460Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-03T20:58:17.792328Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.792393Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.792877Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.795148Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-03T20:58:17.825802Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.240799Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.241402Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.244536Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-03T20:58:18.273502Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.273563Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.274000Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.276599Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-03T20:58:18.277526Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.277918Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.280440Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-03T20:58:18.309941Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.310006Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.424207Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.424717Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.427665Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-03T20:58:18.456729Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.620977Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.621525Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.623940Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-03T20:58:18.653508Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.118598Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.119071Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.121664Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-03T20:58:19.150887Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.151185Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.151315Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.151539Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.152061Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.155512Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T20:58:19.156918Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T20:58:19.157997Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T20:58:19.185097Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.185159Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.185181Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.185375Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.185572Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.187938Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T20:58:19.188654Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T20:58:19.218119Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.218180Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.218362Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.220480Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T20:58:19.250264Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.026089Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T20:58:32.314272Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T20:58:32.314272Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] 
[2026-06-03T20:58:32.314272Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T20:58:32.314332Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] 
[2026-06-03T20:58:32.314340Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T20:58:32.314347Z] [nf-747c24f5440fc2d2a11b480836938bfb-744a4-fxbbv] [573_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec