File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/d3b6afaaf303949f121fe85f260ae2/.command.err
Size
53.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_2;chr16_25246607-25247490.bed)
Attempt

Content

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[2026-06-03T20:58:27.085899Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T20:58:27.096093Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T20:58:27.096130Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T20:58:27.096137Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T20:58:27.096141Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX74UF7f'
[2026-06-03T20:58:27.096146Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T20:58:27.096151Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T20:58:27.096155Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T20:58:27.096159Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T20:58:27.096163Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T20:58:27.096166Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T20:58:27.096170Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T20:58:27.096173Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T20:58:27.096177Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T20:58:27.096625Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T20:58:27.096736Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T20:58:27.102538Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T20:58:27.103253Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T20:58:27.103468Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T20:58:27.103751Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T20:58:27.104073Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.105278Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.105652Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.105814Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.106227Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.108031Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.108189Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T20:58:27.108595Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109054Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109233Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109359Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109428Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109545Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109610Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109726Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109791Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109904Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.109967Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110082Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110145Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110372Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110604Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110721Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110806Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110916Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.110979Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.111090Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.111151Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.111260Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.111327Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.111454Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.111535Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.111790Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112103Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112221Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112319Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112431Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112495Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112607Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112677Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112796Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112857Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.112970Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.113037Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.113163Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.113287Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.113759Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.113828Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.113995Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.114059Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.114165Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.114227Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.114336Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.114398Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.114506Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.114565Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.130165Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.130525Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.130593Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.130740Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.130814Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.130900Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.130965Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.131071Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.131140Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:27.131189Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T20:58:27.132347Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.132992Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.133376Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.133763Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.134529Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.135120Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.136050Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.137895Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.140967Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.144730Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T20:58:27.148113Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:27.153058Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T20:58:27.153581Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T20:58:27.156688Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:27.158496Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:27.159581Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T20:58:27.207706Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.208307Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.211538Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T20:58:27.873949Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.874701Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.877656Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T20:58:28.010958Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T20:58:28.039283Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.039359Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.040030Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.040307Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.043823Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T20:58:28.044533Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T20:58:28.056655Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.057279Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.059885Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:28.089112Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.089718Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.092607Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T20:58:28.605286Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.605932Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.609032Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T20:58:28.871483Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.871570Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.872180Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.872537Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.875606Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:28.875907Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:28.936643Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.936730Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.937288Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.937538Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.940432Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T20:58:28.941458Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:28.971225Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.971810Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.974507Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:29.035897Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.036471Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.039151Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T20:58:29.052292Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.052836Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.055275Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T20:58:29.084828Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.085356Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.087876Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:29.149439Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.149991Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.152511Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:29.182017Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.182540Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.184921Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:29.246527Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.247055Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.249782Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T20:58:29.250681Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.251128Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.253715Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T20:58:29.283106Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.283621Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.286189Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T20:58:29.347819Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.348367Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.350656Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T20:58:29.412341Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.412411Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.412885Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.414629Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.415510Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:29.417837Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T20:58:29.446914Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.447398Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.450033Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:29.511491Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.512007Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.514673Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T20:58:29.520067Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.520541Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.522894Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T20:58:29.552340Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.552867Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.554642Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.555148Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.555334Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T20:58:29.557830Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T20:58:29.587347Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.587435Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.587883Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.588257Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.590652Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T20:58:29.591666Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T20:58:29.620178Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.620607Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.623006Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T20:58:29.652507Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.652955Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.655704Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T20:58:29.684970Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.685424Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.687862Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:29.749370Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.749844Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.752195Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:29.781811Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.781887Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.782284Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.782552Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.785147Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T20:58:29.785951Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T20:58:29.815450Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.815895Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.818461Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T20:58:29.930133Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.930544Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.933231Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:29.962389Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.962833Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.965427Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T20:58:30.027003Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.027466Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.030279Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T20:58:30.031252Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.031698Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.033984Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T20:58:30.063513Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.063578Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.428314Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.428390Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.428782Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.429118Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.431831Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:30.432562Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T20:58:30.461754Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.461817Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.826621Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.826988Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.829275Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T20:58:30.858860Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.423881Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.424269Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.426298Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T20:58:31.456253Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.472029Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.472375Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.474179Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T20:58:31.504323Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.818783Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.819157Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.821598Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T20:58:31.851101Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.851315Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.851454Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.852189Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.853506Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.853972Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T20:58:31.856651Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T20:58:31.857385Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T20:58:31.886163Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.886226Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.886248Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.886442Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.886837Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.889157Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T20:58:31.890020Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T20:58:31.919869Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.919933Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.920101Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.922254Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T20:58:31.951904Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:32.767435Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T20:58:37.642728Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T20:58:37.642728Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] 
[2026-06-03T20:58:37.642728Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T20:58:37.642781Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] 
[2026-06-03T20:58:37.642787Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T20:58:37.642792Z] [nf-e0d3b6afaaf303949f121fe85f260ae2-8265d-jgjd5] [619_1] [WorkflowRunner] Elapsed time for full workflow: 10 sec