File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/88/49aa79d5d1c2028e779d0a3dd5f8f5/.command.err
Size
53.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr16_25246607-25247490.bed)
Attempt

Content

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[2026-06-03T20:58:13.712048Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T20:58:13.720759Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T20:58:13.720786Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T20:58:13.720792Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T20:58:13.720796Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXv5CWlU'
[2026-06-03T20:58:13.720800Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T20:58:13.720805Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T20:58:13.720809Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T20:58:13.720813Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T20:58:13.720829Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T20:58:13.720832Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T20:58:13.720837Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T20:58:13.720843Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T20:58:13.720847Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T20:58:13.721562Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T20:58:13.721676Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T20:58:13.727388Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T20:58:13.728138Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T20:58:13.728302Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T20:58:13.728583Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T20:58:13.728862Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.729754Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.729851Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.729924Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.730191Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.730417Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.730501Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.730769Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.730847Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.730960Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.731026Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.731211Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.731588Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.732038Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.733550Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.734155Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T20:58:13.734335Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.734411Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.734528Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.734588Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.734778Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.734844Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.734954Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.735019Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.735130Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.735193Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.735397Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.735756Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.735866Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.735929Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736037Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736126Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736249Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736310Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736444Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736512Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736626Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736692Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.736969Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737316Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737427Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737489Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737597Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737667Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737773Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737836Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.737949Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.738014Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.738179Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.738264Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.738484Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.738885Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.739007Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.739070Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.739177Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.739239Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.753928Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754229Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754297Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754443Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754516Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754598Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754664Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754768Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754835Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:13.754883Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T20:58:13.758895Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.759381Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.759623Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.761428Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.761664Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T20:58:13.762108Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.763358Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.764966Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T20:58:13.766518Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.767323Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.767707Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T20:58:13.769321Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.774494Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:13.776758Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:13.777513Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T20:58:13.780366Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:13.780789Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T20:58:13.835181Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.835921Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.838893Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T20:58:13.843510Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.844013Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:13.846946Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T20:58:14.509775Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.510509Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.513486Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T20:58:14.574814Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.574893Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.575541Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.575844Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.579340Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T20:58:14.580263Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T20:58:14.640477Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.641182Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.644591Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T20:58:14.705775Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.706465Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.709346Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T20:58:14.738410Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.739109Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.741938Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:14.803173Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.803776Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.806628Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T20:58:14.917937Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.918567Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.921378Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T20:58:14.950568Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.951157Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:14.953780Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T20:58:15.516589Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.517256Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.520097Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:15.581381Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.581945Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.584642Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:15.613912Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.614476Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.617281Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T20:58:15.979213Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.979301Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.979343Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.979927Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.980263Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.980530Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:15.984183Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T20:58:15.985556Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T20:58:15.986867Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T20:58:16.045450Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.045530Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.045562Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.046104Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.046451Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.047139Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.050233Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:16.051689Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T20:58:16.052768Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T20:58:16.081097Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.081632Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.084117Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:16.113576Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.114136Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.117087Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:16.178126Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.178754Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.181580Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T20:58:16.493523Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.493602Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.494103Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.494617Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.497654Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T20:58:16.523927Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T20:58:16.527294Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.527359Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.527806Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.527998Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.530829Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:16.532080Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T20:58:16.560271Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.560787Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.563400Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T20:58:16.592724Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.593229Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.595988Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T20:58:16.657453Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.657966Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.660551Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T20:58:16.689827Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.690332Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.692911Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:16.722390Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.722473Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.722899Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.723256Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.726347Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T20:58:16.726831Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.727143Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:16.727510Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.730415Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T20:58:16.759575Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.759661Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.760071Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.760376Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.763424Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:16.764375Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T20:58:16.824845Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.825311Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.827657Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:16.889320Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.889809Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.892225Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T20:58:16.921895Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.922335Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.924968Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T20:58:16.930091Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.930490Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.932790Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T20:58:16.962313Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.962396Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.962774Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:16.965779Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:16.994864Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.058956Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.059351Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.061866Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:17.091223Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.255575Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.255960Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.258443Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T20:58:17.288075Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.653006Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.653402Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.656307Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:17.685542Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.685607Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.685961Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.688265Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T20:58:17.717845Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.932056Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.932437Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:17.935043Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T20:58:17.964698Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.429405Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.429775Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.432088Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T20:58:18.461683Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.461897Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.462019Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.462261Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.462655Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.466412Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T20:58:18.466640Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T20:58:18.467563Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T20:58:18.495108Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.495167Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.495190Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.495378Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.496023Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.498282Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T20:58:18.499313Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T20:58:18.528807Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.528870Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.529027Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:18.531147Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T20:58:18.561578Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.377111Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T20:58:24.256815Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T20:58:24.256815Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] 
[2026-06-03T20:58:24.256815Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T20:58:24.256865Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] 
[2026-06-03T20:58:24.256872Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T20:58:24.256878Z] [nf-8849aa79d5d1c2028e779d0a3dd5f8f5-f4ecb-zm942] [573_1] [WorkflowRunner] Elapsed time for full workflow: 10 sec