mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-1njnv74x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:00:18,677 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:00:19,455 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:00:19,620 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:00:20,522 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:00:20,704 - cnv_pipe.batch.run_model - INFO - Processing cluster 76 with 186 probes
2026-06-03 21:00:21,071 - cnv_pipe.batch.run_model.cluster76 - INFO - Child process started for cluster 76 with 186 probes
2026-06-03 21:01:15,461 - cnv_pipe.batch.run_model.cluster76 - INFO - Child process finished cluster 76. Wrote cluster_76_samples.csv and cluster_76_params.csv
2026-06-03 21:01:15,462 - cnv_pipe.batch.run_model - INFO - Cluster 76 finished in 54.76 seconds. Status: SUCCESS