mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-sut1tdcj because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:06,697 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:07,656 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:07,850 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:08,899 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:08,976 - cnv_pipe.batch.run_model - INFO - Processing cluster 972 with 173 probes
2026-06-03 21:03:09,518 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process started for cluster 972 with 173 probes
2026-06-03 21:04:07,666 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process finished cluster 972. Wrote cluster_972_samples.csv and cluster_972_params.csv
2026-06-03 21:04:07,667 - cnv_pipe.batch.run_model - INFO - Cluster 972 finished in 58.69 seconds. Status: SUCCESS