cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/FINAL_hotspot_list_07302025_hg38_sorted.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_FINAL_hotspot_list_07302025_hg38_sorted.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:161000001, elapsed 0.0s, est remaining 0.4s, peak mem 100MB, user 0.0s, sys 0.2s, output queue size 3
progress 10% @chr2:73000001, elapsed 0.0s, est remaining 0.4s, peak mem 100MB, user 0.1s, sys 0.7s, output queue size 1
progress 15% @chr2:235000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.2s, sys 1.2s, output queue size 10
progress 20% @chr3:153000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.3s, sys 1.7s, output queue size 9
progress 25% @chr4:115000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.4s, sys 2.2s, output queue size 21
progress 30% @chr5:109000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.4s, sys 2.8s, output queue size 2
progress 35% @chr6:62000001, elapsed 0.1s, est remaining 0.3s, peak mem 100MB, user 0.5s, sys 3.3s, output queue size 3
progress 40% @chr7:52000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 0.6s, sys 3.9s, output queue size 3
progress 45% @chr8:29000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 0.7s, sys 4.6s, output queue size 28
progress 50% @chr9:52000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 0.7s, sys 5.2s, output queue size 21
progress 55% @chr10:93000001, elapsed 0.2s, est remaining 0.2s, peak mem 100MB, user 0.8s, sys 5.7s, output queue size 17
progress 60% @chr11:121000001, elapsed 0.3s, est remaining 0.2s, peak mem 100MB, user 0.9s, sys 6.3s, output queue size 15
progress 65% @chr13:19000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 1.0s, sys 6.9s, output queue size 13
progress 70% @chr14:60000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 1.0s, sys 7.6s, output queue size 16
progress 75% @chr16:11000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 1.1s, sys 8.2s, output queue size 19
progress 80% @chr17:80000001, elapsed 0.3s, est remaining 0.1s, peak mem 100MB, user 1.2s, sys 8.7s, output queue size 20
progress 85% @chr20:22000001, elapsed 0.4s, est remaining 0.1s, peak mem 100MB, user 1.3s, sys 9.2s, output queue size 19
progress 90% @chrX:35000001, elapsed 0.4s, est remaining 0.0s, peak mem 130MB, user 1.7s, sys 9.7s, output queue size 114
progress 95% @chrY:37000001, elapsed 0.4s, est remaining 0.0s, peak mem 142MB, user 2.0s, sys 10.2s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 165MB, user 3.4s, sys 10.7s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: 1f8bfbff fffab20b
  extended: f1bf07ab 1a407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) Platinum 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395361
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.543 user 5.697 sys 7.348 real
done: 1 calls 0.000 user 0.000 sys 0.001 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.008 user 0.001 sys 0.784 real
idle: 81 calls 0.013 user 0.030 sys 40.231 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 173301760 mem 3.653 user 11.440 sys 1.940 real