mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nx5_0ze3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:46,767 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:47,783 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:47,982 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:49,297 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:49,385 - cnv_pipe.batch.run_model - INFO - Processing cluster 858 with 198 probes
2026-06-03 21:02:49,866 - cnv_pipe.batch.run_model.cluster858 - INFO - Child process started for cluster 858 with 198 probes
2026-06-03 21:04:05,348 - cnv_pipe.batch.run_model.cluster858 - INFO - Child process finished cluster 858. Wrote cluster_858_samples.csv and cluster_858_params.csv
2026-06-03 21:04:05,350 - cnv_pipe.batch.run_model - INFO - Cluster 858 finished in 75.96 seconds. Status: SUCCESS