cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:157000001, elapsed 0.0s, est remaining 0.5s, peak mem 114MB, user 0.1s, sys 0.3s, output queue size 4
progress 10% @chr2:71000001, elapsed 0.1s, est remaining 0.5s, peak mem 114MB, user 0.2s, sys 1.0s, output queue size 6
progress 15% @chr2:231000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.3s, sys 1.6s, output queue size 21
progress 20% @chr3:152000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.4s, sys 2.2s, output queue size 1
progress 25% @chr4:117000001, elapsed 0.1s, est remaining 0.4s, peak mem 114MB, user 0.4s, sys 2.9s, output queue size 2
progress 30% @chr5:88000001, elapsed 0.1s, est remaining 0.3s, peak mem 114MB, user 0.5s, sys 3.5s, output queue size 14
progress 35% @chr6:66000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.5s, sys 4.1s, output queue size 10
progress 40% @chr7:55000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.6s, sys 4.8s, output queue size 14
progress 45% @chr8:58000001, elapsed 0.2s, est remaining 0.3s, peak mem 114MB, user 0.6s, sys 5.6s, output queue size 22
progress 50% @chr9:73000001, elapsed 0.2s, est remaining 0.2s, peak mem 114MB, user 0.7s, sys 6.1s, output queue size 2
progress 55% @chr10:97000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.7s, sys 6.8s, output queue size 6
progress 60% @chr11:105000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.8s, sys 7.5s, output queue size 18
progress 65% @chr13:15000001, elapsed 0.3s, est remaining 0.2s, peak mem 114MB, user 0.8s, sys 8.2s, output queue size 21
progress 70% @chr14:61000001, elapsed 0.3s, est remaining 0.1s, peak mem 114MB, user 0.9s, sys 8.8s, output queue size 4
progress 75% @chr16:13000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 0.9s, sys 9.5s, output queue size 1
progress 80% @chr17:82000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 1.0s, sys 10.1s, output queue size 2
progress 85% @chr20:21000001, elapsed 0.4s, est remaining 0.1s, peak mem 114MB, user 1.0s, sys 10.7s, output queue size 5
progress 90% @chrX:38000001, elapsed 0.4s, est remaining 0.0s, peak mem 144MB, user 1.4s, sys 11.2s, output queue size 114
progress 95% @chrY:37000001, elapsed 0.5s, est remaining 0.0s, peak mem 160MB, user 1.8s, sys 11.8s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.8s, est remaining 0.0s, peak mem 178MB, user 3.1s, sys 12.7s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395361
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.040 user 6.492 sys 7.608 real
done: 1 calls 0.005 user 0.000 sys 0.008 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.002 user 0.001 sys 0.793 real
idle: 76 calls 0.008 user 0.018 sys 38.751 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 187432960 mem 3.539 user 13.476 sys 2.274 real