File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/a3b9ed41af15f0bd7f827ca764b4a1/.command.err
Size
53.7 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (negative_somatic_control_1;chr16_25246607-25247490.bed)
Attempt

Content

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[2026-06-03T20:58:21.503289Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T20:58:21.504170Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T20:58:21.504184Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T20:58:21.504190Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T20:58:21.504194Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXT1XvwY'
[2026-06-03T20:58:21.504198Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T20:58:21.504203Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T20:58:21.504207Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T20:58:21.504211Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T20:58:21.504214Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T20:58:21.504218Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T20:58:21.504221Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T20:58:21.504225Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T20:58:21.504229Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T20:58:21.504906Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T20:58:21.505027Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T20:58:21.510668Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T20:58:21.511466Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T20:58:21.511660Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T20:58:21.511914Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T20:58:21.512098Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.513475Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.513727Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.513833Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.514228Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.514691Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.514861Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.515142Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.515247Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.516787Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.517314Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T20:58:21.517563Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.517820Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.517895Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518016Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518086Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518202Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518266Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518380Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518444Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518642Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.518714Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.519150Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.519401Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.519743Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.519827Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.519955Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520021Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520133Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520196Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520304Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520382Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520495Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520610Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520732Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.520890Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.521152Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.521510Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.521920Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.521984Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522094Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522153Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522263Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522330Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522436Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522499Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522612Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522726Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.522864Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.523000Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.523229Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.523661Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.523783Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.523853Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.523970Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.524034Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.539285Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.539553Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.539638Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.539804Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.539884Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.540000Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.540209Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.540417Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.540489Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:21.540539Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T20:58:21.540707Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.541411Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.541867Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.542335Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.543290Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.544180Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.545325Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.547897Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.549435Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.552601Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:21.554716Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:21.556992Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T20:58:21.560622Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:21.561406Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T20:58:21.566319Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T20:58:21.567667Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:21.617399Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.617465Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.617999Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.618393Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.622091Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:21.623073Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:21.627424Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:21.634487Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.635087Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.637603Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:21.699319Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.699960Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.702489Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0004] Task initiated on local node
[2026-06-03T20:58:21.731926Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.732531Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.735012Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T20:58:22.397771Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.397878Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.398494Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.398996Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.401651Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-03T20:58:22.402465Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T20:58:22.430911Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.431474Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.433974Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:22.495609Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.496307Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.498883Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T20:58:22.610409Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.610488Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.611037Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.611339Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.613882Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-03T20:58:22.614947Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-03T20:58:22.644255Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.644333Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.644866Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.645129Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.648193Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T20:58:22.648930Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T20:58:22.960484Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.961148Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.963991Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T20:58:23.275837Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.276448Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.278998Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-03T20:58:23.308657Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.309264Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.311660Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T20:58:23.573640Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.574272Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.576734Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0004] Task initiated on local node
[2026-06-03T20:58:23.606470Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.607045Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.609481Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-03T20:58:23.639034Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.639590Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.641782Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-03T20:58:23.671611Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.672193Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.674728Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-03T20:58:23.688019Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.688525Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.690951Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T20:58:23.704435Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.704926Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.707189Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0002] Task initiated on local node
[2026-06-03T20:58:23.736992Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.737530Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.739930Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T20:58:23.741126Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.741557Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.743697Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0003] Task initiated on local node
[2026-06-03T20:58:23.773487Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.774021Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.776216Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T20:58:23.938680Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.939227Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.941876Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0004] Task initiated on local node
[2026-06-03T20:58:23.971201Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.971721Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.974229Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-03T20:58:24.035659Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.035733Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.035794Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.036264Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.036835Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.037244Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.040342Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0001] Task initiated on local node
[2026-06-03T20:58:24.041499Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T20:58:24.042686Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T20:58:24.069533Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.069996Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.072355Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T20:58:24.133949Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.134432Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.136740Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0003] Task initiated on local node
[2026-06-03T20:58:24.166398Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.166863Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.169152Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0006] Task initiated on local node
[2026-06-03T20:58:24.198694Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.199151Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.201661Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T20:58:24.230994Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.231483Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.233934Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0000] Task initiated on local node
[2026-06-03T20:58:24.263459Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.263927Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.266290Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0003] Task initiated on local node
[2026-06-03T20:58:24.295746Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.296188Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.298580Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T20:58:24.360405Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.360852Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.363736Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0002] Task initiated on local node
[2026-06-03T20:58:24.392896Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.393361Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.395774Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T20:58:24.608122Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.608615Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.610929Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0005] Task initiated on local node
[2026-06-03T20:58:24.640432Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.754660Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.754741Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.755120Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.756646Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.758239Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0006] Task initiated on local node
[2026-06-03T20:58:24.759127Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0000] Task initiated on local node
[2026-06-03T20:58:24.788862Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.788934Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.053305Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.053702Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.055990Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_018_chr19_0001] Task initiated on local node
[2026-06-03T20:58:25.085528Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_018_chr19_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.199657Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.200055Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.202297Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_017_chr18_0001] Task initiated on local node
[2026-06-03T20:58:25.232187Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_017_chr18_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.346544Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.346894Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.349392Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0002] Task initiated on local node
[2026-06-03T20:58:25.378679Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.793424Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.793779Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.796115Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0005] Task initiated on local node
[2026-06-03T20:58:25.825560Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.240458Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.240799Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.242838Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_016_chr17_0000] Task initiated on local node
[2026-06-03T20:58:26.272663Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_016_chr17_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.272924Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.273053Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.273363Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.273857Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.276733Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T20:58:26.277943Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T20:58:26.278925Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T20:58:26.306930Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.307000Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.307022Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.307205Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.307583Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.309859Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T20:58:26.310569Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T20:58:26.339296Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.339371Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.339542Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.341653Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T20:58:26.371471Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.187264Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T20:58:32.063163Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T20:58:32.063163Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] 
[2026-06-03T20:58:32.063163Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T20:58:32.063208Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] 
[2026-06-03T20:58:32.063214Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T20:58:32.063219Z] [nf-f8a3b9ed41af15f0bd7f827ca764b4a1-e219a-hp5ns] [570_1] [WorkflowRunner] Elapsed time for full workflow: 10 sec