mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g1x1fn4o because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:56,853 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:57,686 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:57,863 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:58,811 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:59,015 - cnv_pipe.batch.run_model - INFO - Processing cluster 1239 with 187 probes
2026-06-03 21:03:59,412 - cnv_pipe.batch.run_model.cluster1239 - INFO - Child process started for cluster 1239 with 187 probes
2026-06-03 21:04:53,364 - cnv_pipe.batch.run_model.cluster1239 - INFO - Child process finished cluster 1239. Wrote cluster_1239_samples.csv and cluster_1239_params.csv
2026-06-03 21:04:53,366 - cnv_pipe.batch.run_model - INFO - Cluster 1239 finished in 54.35 seconds. Status: SUCCESS