mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4bfup9sr because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:03,935 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:04,735 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:04,903 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:05,928 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:05,996 - cnv_pipe.batch.run_model - INFO - Processing cluster 962 with 112 probes
2026-06-03 21:03:06,371 - cnv_pipe.batch.run_model.cluster962 - INFO - Child process started for cluster 962 with 112 probes
2026-06-03 21:03:40,878 - cnv_pipe.batch.run_model.cluster962 - INFO - Child process finished cluster 962. Wrote cluster_962_samples.csv and cluster_962_params.csv
2026-06-03 21:03:40,879 - cnv_pipe.batch.run_model - INFO - Cluster 962 finished in 34.88 seconds. Status: SUCCESS