File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ce/1fa6766b31da9ec559807f39f3f7c6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-rwaj5h_c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:01:53,032 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:01:53,819 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:01:53,986 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:01:54,858 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:01:55,036 - cnv_pipe.batch.run_model - INFO - Processing cluster 596 with 180 probes
2026-06-03 21:01:55,407 - cnv_pipe.batch.run_model.cluster596 - INFO - Child process started for cluster 596 with 180 probes
2026-06-03 21:02:47,065 - cnv_pipe.batch.run_model.cluster596 - INFO - Child process finished cluster 596. Wrote cluster_596_samples.csv and cluster_596_params.csv
2026-06-03 21:02:47,067 - cnv_pipe.batch.run_model - INFO - Cluster 596 finished in 52.03 seconds. Status: SUCCESS