mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-xbtjiyma because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:16,375 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:17,296 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:17,486 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:18,492 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:18,643 - cnv_pipe.batch.run_model - INFO - Processing cluster 1019 with 112 probes
2026-06-03 21:03:19,088 - cnv_pipe.batch.run_model.cluster1019 - INFO - Child process started for cluster 1019 with 112 probes
2026-06-03 21:03:58,353 - cnv_pipe.batch.run_model.cluster1019 - INFO - Child process finished cluster 1019. Wrote cluster_1019_samples.csv and cluster_1019_params.csv
2026-06-03 21:03:58,354 - cnv_pipe.batch.run_model - INFO - Cluster 1019 finished in 39.71 seconds. Status: SUCCESS