mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r4i6hqz0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:01:29,481 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:01:30,290 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:01:30,459 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:01:31,383 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:01:31,466 - cnv_pipe.batch.run_model - INFO - Processing cluster 479 with 175 probes
2026-06-03 21:01:31,946 - cnv_pipe.batch.run_model.cluster479 - INFO - Child process started for cluster 479 with 175 probes
2026-06-03 21:02:22,298 - cnv_pipe.batch.run_model.cluster479 - INFO - Child process finished cluster 479. Wrote cluster_479_samples.csv and cluster_479_params.csv
2026-06-03 21:02:22,299 - cnv_pipe.batch.run_model - INFO - Cluster 479 finished in 50.83 seconds. Status: SUCCESS