[2026-06-03T20:58:25.082131Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T20:58:25.084153Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T20:58:25.084165Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T20:58:25.084170Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T20:58:25.084174Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXedqeqV'
[2026-06-03T20:58:25.084178Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T20:58:25.084183Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T20:58:25.084186Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T20:58:25.084190Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T20:58:25.084194Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T20:58:25.084199Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T20:58:25.084204Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T20:58:25.084212Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T20:58:25.084216Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T20:58:25.084786Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T20:58:25.084915Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T20:58:25.090681Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T20:58:25.091419Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T20:58:25.091675Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T20:58:25.091901Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T20:58:25.092135Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.092659Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.092750Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.092822Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.092937Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.093004Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.093124Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.093197Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.093503Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.093769Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.093963Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.094359Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.094918Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.095882Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.096904Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.097004Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T20:58:25.097382Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.097576Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.097857Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.097925Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098116Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098183Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098294Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098361Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098469Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098530Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098648Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098713Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098827Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.098997Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.099379Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.099466Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.099596Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.099658Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.099772Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.099834Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.099947Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.100012Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.100122Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.100183Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.100295Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.100374Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.100642Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101017Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101129Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101191Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101304Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101420Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101564Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101630Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101736Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101800Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101909Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.101968Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.102231Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.102656Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.102770Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.102835Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.102940Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103003Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103113Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103174Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103285Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103347Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103475Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103549Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.103694Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.104253Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.104833Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.104900Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.105011Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.105074Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.105182Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.105245Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.106636Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107241Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107372Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107461Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107587Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107655Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107772Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107834Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.107948Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.108012Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.108120Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.108241Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.108510Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109154Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109290Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109353Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109466Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109533Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109644Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109707Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109820Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109883Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.109996Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.110061Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.126464Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.127078Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.127241Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.128084Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.128290Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.128885Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.129074Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.129515Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.130099Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.130477Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.130939Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.131374Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.131851Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.132931Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.133421Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.134116Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.134433Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:25.135311Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T20:58:25.136151Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.140309Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0001] Task initiated on local node
[2026-06-03T20:58:25.142701Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0014] Task initiated on local node
[2026-06-03T20:58:25.144925Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0001] Task initiated on local node
[2026-06-03T20:58:25.147357Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T20:58:25.149731Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0004] Task initiated on local node
[2026-06-03T20:58:25.153270Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0013] Task initiated on local node
[2026-06-03T20:58:25.155286Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T20:58:25.156470Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0002] Task initiated on local node
[2026-06-03T20:58:25.219853Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.219947Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.220755Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.221063Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.225445Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0012] Task initiated on local node
[2026-06-03T20:58:25.225730Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0000] Task initiated on local node
[2026-06-03T20:58:25.737157Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.738222Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.741554Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T20:58:25.802760Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.803801Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.806604Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0009] Task initiated on local node
[2026-06-03T20:58:25.867793Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.868779Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.871377Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0002] Task initiated on local node
[2026-06-03T20:58:25.982874Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.983963Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.986795Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0003] Task initiated on local node
[2026-06-03T20:58:26.047963Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.048034Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.048950Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.049213Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.052273Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0010] Task initiated on local node
[2026-06-03T20:58:26.053049Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0007] Task initiated on local node
[2026-06-03T20:58:26.082881Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.082963Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.083862Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.084249Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.087338Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0000] Task initiated on local node
[2026-06-03T20:58:26.088383Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0011] Task initiated on local node
[2026-06-03T20:58:26.116413Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.117323Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.119811Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0001] Task initiated on local node
[2026-06-03T20:58:26.149232Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.150122Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.152734Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T20:58:26.214018Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.214893Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.217532Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0005] Task initiated on local node
[2026-06-03T20:58:26.246951Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.247032Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.247938Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.248272Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.251192Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0012] Task initiated on local node
[2026-06-03T20:58:26.252269Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T20:58:26.282078Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.282993Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.285617Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0016] Task initiated on local node
[2026-06-03T20:58:26.315060Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.316027Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.318688Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0004] Task initiated on local node
[2026-06-03T20:58:26.347927Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.348836Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.351378Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0003] Task initiated on local node
[2026-06-03T20:58:27.014289Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.015314Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.018322Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T20:58:27.079903Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.080834Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.083494Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0003] Task initiated on local node
[2026-06-03T20:58:27.295225Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.296191Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.298992Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0004] Task initiated on local node
[2026-06-03T20:58:27.328009Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.328849Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.331628Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0001] Task initiated on local node
[2026-06-03T20:58:27.360771Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.361598Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.364322Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0009] Task initiated on local node
[2026-06-03T20:58:27.393612Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.394425Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.397456Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T20:58:27.458349Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.459185Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.462111Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0014] Task initiated on local node
[2026-06-03T20:58:27.491168Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.492010Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.493913Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.494554Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0014] Task initiated on local node
[2026-06-03T20:58:27.494982Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.497131Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0016] Task initiated on local node
[2026-06-03T20:58:27.526696Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0016' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.526759Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.527531Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.528193Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.531294Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0012] Task initiated on local node
[2026-06-03T20:58:27.532322Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0002] Task initiated on local node
[2026-06-03T20:58:27.560310Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.561103Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.563799Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T20:58:27.625148Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.626018Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.628555Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0000] Task initiated on local node
[2026-06-03T20:58:27.689960Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.690041Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.690776Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.691036Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.694141Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0002] Task initiated on local node
[2026-06-03T20:58:27.694965Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0010] Task initiated on local node
[2026-06-03T20:58:27.755545Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.756441Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.758737Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0011] Task initiated on local node
[2026-06-03T20:58:27.788420Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.789236Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:27.791602Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0008] Task initiated on local node
[2026-06-03T20:58:28.053941Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.054763Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.057713Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0003] Task initiated on local node
[2026-06-03T20:58:28.087027Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.087869Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.090457Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0005] Task initiated on local node
[2026-06-03T20:58:28.202170Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.202924Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.205672Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0001] Task initiated on local node
[2026-06-03T20:58:28.234787Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.235592Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.238791Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T20:58:28.300062Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.300125Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.300854Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.301167Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.304106Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0013] Task initiated on local node
[2026-06-03T20:58:28.305044Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0000] Task initiated on local node
[2026-06-03T20:58:28.365887Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.365957Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.366695Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.367031Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.370107Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0000] Task initiated on local node
[2026-06-03T20:58:28.370530Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T20:58:28.399759Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.400489Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.403065Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0006] Task initiated on local node
[2026-06-03T20:58:28.432332Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.433064Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.435696Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0006] Task initiated on local node
[2026-06-03T20:58:28.465051Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.465123Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.465835Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.466092Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.469040Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0000] Task initiated on local node
[2026-06-03T20:58:28.469941Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_021_chr22_0004] Task initiated on local node
[2026-06-03T20:58:28.499393Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.500136Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.502601Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T20:58:28.564260Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.565031Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.567686Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0002] Task initiated on local node
[2026-06-03T20:58:28.596982Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.597694Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.600397Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0015] Task initiated on local node
[2026-06-03T20:58:28.629675Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.629742Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.630362Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.630799Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.634093Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T20:58:28.634502Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0003] Task initiated on local node
[2026-06-03T20:58:28.695128Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.695880Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.698530Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0002] Task initiated on local node
[2026-06-03T20:58:28.727892Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.728558Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.730945Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0009] Task initiated on local node
[2026-06-03T20:58:28.760646Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.761302Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.764113Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0003] Task initiated on local node
[2026-06-03T20:58:28.793362Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.793996Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.796612Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_020_chr21_0001] Task initiated on local node
[2026-06-03T20:58:28.858043Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.858715Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.861156Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0003] Task initiated on local node
[2026-06-03T20:58:28.890589Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.891239Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.893856Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0007] Task initiated on local node
[2026-06-03T20:58:28.955210Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.955923Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.958371Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0002] Task initiated on local node
[2026-06-03T20:58:28.987857Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.988488Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:28.991233Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T20:58:29.102688Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.102775Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.103382Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.103787Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.106930Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0006] Task initiated on local node
[2026-06-03T20:58:29.107795Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0005] Task initiated on local node
[2026-06-03T20:58:29.135834Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.136505Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.139508Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T20:58:29.200716Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.201369Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.204115Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0007] Task initiated on local node
[2026-06-03T20:58:29.233252Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.233898Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.236574Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0001] Task initiated on local node
[2026-06-03T20:58:29.498393Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.499057Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.501522Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0010] Task initiated on local node
[2026-06-03T20:58:29.531050Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.531688Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.534203Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T20:58:29.595910Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.596511Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.598918Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0002] Task initiated on local node
[2026-06-03T20:58:29.628661Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.629265Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.631779Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T20:58:29.693157Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.693224Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.693733Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.693983Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.697005Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0002] Task initiated on local node
[2026-06-03T20:58:29.698232Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_019_chr20_0004] Task initiated on local node
[2026-06-03T20:58:29.726480Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.727023Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.729673Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_002_chr3_0015] Task initiated on local node
[2026-06-03T20:58:29.941417Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.942101Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.944893Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_021_chr22_0004] Task initiated on local node
[2026-06-03T20:58:29.974019Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_021_chr22_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.974103Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.974646Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.974874Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:29.977571Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0001] Task initiated on local node
[2026-06-03T20:58:30.005388Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0008] Task initiated on local node
[2026-06-03T20:58:30.007284Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.007357Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.007905Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.008238Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.011262Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0008] Task initiated on local node
[2026-06-03T20:58:30.011876Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T20:58:30.012103Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.012592Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.014877Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T20:58:30.044318Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.044849Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.047215Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0005] Task initiated on local node
[2026-06-03T20:58:30.060635Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.060702Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.061191Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.061495Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.064056Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0005] Task initiated on local node
[2026-06-03T20:58:30.064897Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0000] Task initiated on local node
[2026-06-03T20:58:30.077385Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.077893Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.080345Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0013] Task initiated on local node
[2026-06-03T20:58:30.093542Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.094011Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.096459Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0011] Task initiated on local node
[2026-06-03T20:58:30.097499Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.097929Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.100303Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0003] Task initiated on local node
[2026-06-03T20:58:30.113694Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.129484Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.129541Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.393963Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.394422Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.397061Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0001] Task initiated on local node
[2026-06-03T20:58:30.426316Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.791036Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.791516Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.793841Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_003_chr4_0000] Task initiated on local node
[2026-06-03T20:58:30.824485Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_003_chr4_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.888480Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.888899Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.890925Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_002_chr3_0015] Task initiated on local node
[2026-06-03T20:58:30.920694Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_002_chr3_0015' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.034738Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.035119Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:31.037616Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_019_chr20_0004] Task initiated on local node
[2026-06-03T20:58:31.066972Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_019_chr20_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.283885Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.284329Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.286844Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_020_chr21_0003] Task initiated on local node
[2026-06-03T20:58:37.316256Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_020_chr21_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.316534Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.316659Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.317568Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.318033Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.320976Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T20:58:37.322476Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T20:58:37.323460Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T20:58:37.350207Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.350264Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.350285Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.350463Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.350696Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.353418Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T20:58:37.353941Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T20:58:37.382664Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.382729Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.382909Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:37.385098Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T20:58:37.414852Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:44.082778Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T20:58:58.203977Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T20:58:58.203977Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] 
[2026-06-03T20:58:58.203977Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T20:58:58.204051Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] 
[2026-06-03T20:58:58.204059Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T20:58:58.204066Z] [nf-66650f48823f268cd55c80149438bd63-2ff95-rlmgb] [563_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec