mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-eooydxd5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:11,627 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:12,627 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:12,826 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:13,998 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:14,180 - cnv_pipe.batch.run_model - INFO - Processing cluster 686 with 196 probes
2026-06-03 21:02:14,655 - cnv_pipe.batch.run_model.cluster686 - INFO - Child process started for cluster 686 with 196 probes
2026-06-03 21:03:29,838 - cnv_pipe.batch.run_model.cluster686 - INFO - Child process finished cluster 686. Wrote cluster_686_samples.csv and cluster_686_params.csv
2026-06-03 21:03:29,839 - cnv_pipe.batch.run_model - INFO - Cluster 686 finished in 75.66 seconds. Status: SUCCESS