File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e1/339805cd1d1390dcc076c345ec1e63/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-uq_95i5q because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:31,455 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:32,240 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:32,407 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:33,274 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:33,435 - cnv_pipe.batch.run_model - INFO - Processing cluster 1108 with 197 probes
2026-06-03 21:03:33,799 - cnv_pipe.batch.run_model.cluster1108 - INFO - Child process started for cluster 1108 with 197 probes
2026-06-03 21:04:29,035 - cnv_pipe.batch.run_model.cluster1108 - INFO - Child process finished cluster 1108. Wrote cluster_1108_samples.csv and cluster_1108_params.csv
2026-06-03 21:04:29,036 - cnv_pipe.batch.run_model - INFO - Cluster 1108 finished in 55.60 seconds. Status: SUCCESS