File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/85/90f0a52961088b16ee9257c70de619/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-aq8ggnk8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:14,686 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:15,510 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:15,688 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:16,693 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:16,904 - cnv_pipe.batch.run_model - INFO - Processing cluster 708 with 185 probes
2026-06-03 21:02:17,281 - cnv_pipe.batch.run_model.cluster708 - INFO - Child process started for cluster 708 with 185 probes
2026-06-03 21:03:13,197 - cnv_pipe.batch.run_model.cluster708 - INFO - Child process finished cluster 708. Wrote cluster_708_samples.csv and cluster_708_params.csv
2026-06-03 21:03:13,198 - cnv_pipe.batch.run_model - INFO - Cluster 708 finished in 56.29 seconds. Status: SUCCESS