File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/bf07d1a250b7b12b1878ad9bfff5d2/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y5peyj9_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:27,635 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:28,457 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:28,627 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:29,527 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:29,686 - cnv_pipe.batch.run_model - INFO - Processing cluster 770 with 156 probes
2026-06-03 21:02:30,054 - cnv_pipe.batch.run_model.cluster770 - INFO - Child process started for cluster 770 with 156 probes
2026-06-03 21:03:16,747 - cnv_pipe.batch.run_model.cluster770 - INFO - Child process finished cluster 770. Wrote cluster_770_samples.csv and cluster_770_params.csv
2026-06-03 21:03:16,749 - cnv_pipe.batch.run_model - INFO - Cluster 770 finished in 47.06 seconds. Status: SUCCESS