File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/70face7aae6e21f9b1cd75a1b94405/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-7_zb0wwk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:25,024 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:25,831 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:26,001 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:26,939 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:27,027 - cnv_pipe.batch.run_model - INFO - Processing cluster 762 with 178 probes
2026-06-03 21:02:27,528 - cnv_pipe.batch.run_model.cluster762 - INFO - Child process started for cluster 762 with 178 probes
2026-06-03 21:03:17,882 - cnv_pipe.batch.run_model.cluster762 - INFO - Child process finished cluster 762. Wrote cluster_762_samples.csv and cluster_762_params.csv
2026-06-03 21:03:17,883 - cnv_pipe.batch.run_model - INFO - Cluster 762 finished in 50.86 seconds. Status: SUCCESS