File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e0/90dc3af9d69e546460a3457727db7c/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-5_p0gpqm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:33,910 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:34,719 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:34,887 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:35,762 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:35,828 - cnv_pipe.batch.run_model - INFO - Processing cluster 805 with 192 probes
2026-06-03 21:02:36,307 - cnv_pipe.batch.run_model.cluster805 - INFO - Child process started for cluster 805 with 192 probes
2026-06-03 21:03:30,257 - cnv_pipe.batch.run_model.cluster805 - INFO - Child process finished cluster 805. Wrote cluster_805_samples.csv and cluster_805_params.csv
2026-06-03 21:03:30,258 - cnv_pipe.batch.run_model - INFO - Cluster 805 finished in 54.43 seconds. Status: SUCCESS