cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_BL.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_BL_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:163000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.1s, sys 0.2s, output queue size 15
progress 10% @chr2:77000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.2s, sys 0.7s, output queue size 27
progress 15% @chr2:236000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.2s, sys 1.2s, output queue size 17
progress 20% @chr3:121000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.3s, sys 1.7s, output queue size 32
progress 25% @chr4:97000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.4s, sys 2.3s, output queue size 18
progress 30% @chr5:89000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.4s, sys 2.8s, output queue size 34
progress 35% @chr6:67000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.6s, sys 3.3s, output queue size 15
progress 40% @chr7:20000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.7s, sys 3.9s, output queue size 35
progress 45% @chr8:60000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.8s, sys 4.4s, output queue size 13
progress 50% @chr9:76000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.8s, sys 4.9s, output queue size 21
progress 55% @chr10:95000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 0.9s, sys 5.4s, output queue size 13
progress 60% @chr11:127000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 1.0s, sys 6.0s, output queue size 20
progress 65% @chr13:15000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.1s, sys 6.5s, output queue size 4
progress 70% @chr14:61000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.2s, sys 7.0s, output queue size 26
progress 75% @chr16:17000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.2s, sys 7.6s, output queue size 18
progress 80% @chr18:1, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.2s, sys 8.2s, output queue size 26
progress 85% @chr20:24000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 1.3s, sys 8.7s, output queue size 14
progress 90% @chrX:34000001, elapsed 0.4s, est remaining 0.0s, peak mem 145MB, user 1.7s, sys 9.1s, output queue size 114
progress 95% @chrY:38000001, elapsed 0.4s, est remaining 0.0s, peak mem 163MB, user 2.0s, sys 9.6s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 178MB, user 3.6s, sys 10.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 51395361
reads: 1001089
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.204 user 5.291 sys 6.639 real
done: 1 calls 0.002 user 0.000 sys 0.008 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.002 sys 0.932 real
idle: 74 calls 0.011 user 0.022 sys 45.037 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 186867712 mem 4.071 user 10.919 sys 2.422 real