File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/32/56d32933250381257d1b14df573707/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8j6ft5uq because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:23,779 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:24,557 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:24,722 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:25,612 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:25,784 - cnv_pipe.batch.run_model - INFO - Processing cluster 756 with 186 probes
2026-06-03 21:02:26,150 - cnv_pipe.batch.run_model.cluster756 - INFO - Child process started for cluster 756 with 186 probes
2026-06-03 21:03:18,488 - cnv_pipe.batch.run_model.cluster756 - INFO - Child process finished cluster 756. Wrote cluster_756_samples.csv and cluster_756_params.csv
2026-06-03 21:03:18,489 - cnv_pipe.batch.run_model - INFO - Cluster 756 finished in 52.71 seconds. Status: SUCCESS