mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_cucn_kt because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:01:54,460 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:01:55,295 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:01:55,470 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:01:56,524 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:01:56,598 - cnv_pipe.batch.run_model - INFO - Processing cluster 601 with 188 probes
2026-06-03 21:01:56,969 - cnv_pipe.batch.run_model.cluster601 - INFO - Child process started for cluster 601 with 188 probes
2026-06-03 21:02:51,742 - cnv_pipe.batch.run_model.cluster601 - INFO - Child process finished cluster 601. Wrote cluster_601_samples.csv and cluster_601_params.csv
2026-06-03 21:02:51,744 - cnv_pipe.batch.run_model - INFO - Cluster 601 finished in 55.15 seconds. Status: SUCCESS