mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ys9gjvo7 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:09,548 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:10,348 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:10,516 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:11,414 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:11,611 - cnv_pipe.batch.run_model - INFO - Processing cluster 990 with 200 probes
2026-06-03 21:03:11,981 - cnv_pipe.batch.run_model.cluster990 - INFO - Child process started for cluster 990 with 200 probes
2026-06-03 21:04:08,480 - cnv_pipe.batch.run_model.cluster990 - INFO - Child process finished cluster 990. Wrote cluster_990_samples.csv and cluster_990_params.csv
2026-06-03 21:04:08,482 - cnv_pipe.batch.run_model - INFO - Cluster 990 finished in 56.87 seconds. Status: SUCCESS