File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/55/a60982c19fc88dd9a705a976a6c3c2/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ovefo7ns because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:43,919 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:44,706 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:44,873 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:45,726 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:45,885 - cnv_pipe.batch.run_model - INFO - Processing cluster 1175 with 158 probes
2026-06-03 21:03:46,250 - cnv_pipe.batch.run_model.cluster1175 - INFO - Child process started for cluster 1175 with 158 probes
2026-06-03 21:04:31,416 - cnv_pipe.batch.run_model.cluster1175 - INFO - Child process finished cluster 1175. Wrote cluster_1175_samples.csv and cluster_1175_params.csv
2026-06-03 21:04:31,417 - cnv_pipe.batch.run_model - INFO - Cluster 1175 finished in 45.53 seconds. Status: SUCCESS