mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j7tcp9d9 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:10,099 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:10,889 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:11,055 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:11,911 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:11,974 - cnv_pipe.batch.run_model - INFO - Processing cluster 688 with 177 probes
2026-06-03 21:02:12,425 - cnv_pipe.batch.run_model.cluster688 - INFO - Child process started for cluster 688 with 177 probes
2026-06-03 21:03:03,469 - cnv_pipe.batch.run_model.cluster688 - INFO - Child process finished cluster 688. Wrote cluster_688_samples.csv and cluster_688_params.csv
2026-06-03 21:03:03,470 - cnv_pipe.batch.run_model - INFO - Cluster 688 finished in 51.50 seconds. Status: SUCCESS