mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-q8nb61mm because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:00:11,089 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:00:11,866 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:00:12,037 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:00:12,968 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:00:13,130 - cnv_pipe.batch.run_model - INFO - Processing cluster 9 with 189 probes
2026-06-03 21:00:13,493 - cnv_pipe.batch.run_model.cluster9 - INFO - Child process started for cluster 9 with 189 probes
2026-06-03 21:01:06,334 - cnv_pipe.batch.run_model.cluster9 - INFO - Child process finished cluster 9. Wrote cluster_9_samples.csv and cluster_9_params.csv
2026-06-03 21:01:06,335 - cnv_pipe.batch.run_model - INFO - Cluster 9 finished in 53.20 seconds. Status: SUCCESS