mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-kuy66sib because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:01:40,300 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:01:41,301 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:01:41,502 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:01:42,736 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:01:42,943 - cnv_pipe.batch.run_model - INFO - Processing cluster 526 with 144 probes
2026-06-03 21:01:43,436 - cnv_pipe.batch.run_model.cluster526 - INFO - Child process started for cluster 526 with 144 probes
2026-06-03 21:02:40,389 - cnv_pipe.batch.run_model.cluster526 - INFO - Child process finished cluster 526. Wrote cluster_526_samples.csv and cluster_526_params.csv
2026-06-03 21:02:40,390 - cnv_pipe.batch.run_model - INFO - Cluster 526 finished in 57.45 seconds. Status: SUCCESS