File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/39/27b89b9977426e7ebfe70886717f10/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_9m9hl78 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:53,982 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:54,779 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:54,949 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:55,958 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:56,030 - cnv_pipe.batch.run_model - INFO - Processing cluster 910 with 181 probes
2026-06-03 21:02:56,397 - cnv_pipe.batch.run_model.cluster910 - INFO - Child process started for cluster 910 with 181 probes
2026-06-03 21:03:47,574 - cnv_pipe.batch.run_model.cluster910 - INFO - Child process finished cluster 910. Wrote cluster_910_samples.csv and cluster_910_params.csv
2026-06-03 21:03:47,575 - cnv_pipe.batch.run_model - INFO - Cluster 910 finished in 51.54 seconds. Status: SUCCESS