mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-04ro6pdv because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:00:15,081 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:00:15,850 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:00:16,013 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:00:16,969 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:00:17,038 - cnv_pipe.batch.run_model - INFO - Processing cluster 74 with 199 probes
2026-06-03 21:00:17,403 - cnv_pipe.batch.run_model.cluster74 - INFO - Child process started for cluster 74 with 199 probes
2026-06-03 21:01:13,053 - cnv_pipe.batch.run_model.cluster74 - INFO - Child process finished cluster 74. Wrote cluster_74_samples.csv and cluster_74_params.csv
2026-06-03 21:01:13,054 - cnv_pipe.batch.run_model - INFO - Cluster 74 finished in 56.02 seconds. Status: SUCCESS