mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2qgl3ob0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:01,714 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:02,504 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:02,670 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:03,561 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:03,709 - cnv_pipe.batch.run_model - INFO - Processing cluster 952 with 197 probes
2026-06-03 21:03:04,086 - cnv_pipe.batch.run_model.cluster952 - INFO - Child process started for cluster 952 with 197 probes
2026-06-03 21:04:01,784 - cnv_pipe.batch.run_model.cluster952 - INFO - Child process finished cluster 952. Wrote cluster_952_samples.csv and cluster_952_params.csv
2026-06-03 21:04:01,785 - cnv_pipe.batch.run_model - INFO - Cluster 952 finished in 58.08 seconds. Status: SUCCESS