mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-gfck2svi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:01:53,199 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:01:53,980 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:01:54,147 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:01:55,025 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:01:55,185 - cnv_pipe.batch.run_model - INFO - Processing cluster 598 with 194 probes
2026-06-03 21:01:55,549 - cnv_pipe.batch.run_model.cluster598 - INFO - Child process started for cluster 598 with 194 probes
2026-06-03 21:02:50,562 - cnv_pipe.batch.run_model.cluster598 - INFO - Child process finished cluster 598. Wrote cluster_598_samples.csv and cluster_598_params.csv
2026-06-03 21:02:50,563 - cnv_pipe.batch.run_model - INFO - Cluster 598 finished in 55.38 seconds. Status: SUCCESS