File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7a/64fcc7ca1b020ae6115fd3f7b8640f/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-m8x_wm4x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:02:37,706 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:02:38,573 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:02:38,763 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:02:39,821 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:02:40,014 - cnv_pipe.batch.run_model - INFO - Processing cluster 823 with 193 probes
2026-06-03 21:02:40,396 - cnv_pipe.batch.run_model.cluster823 - INFO - Child process started for cluster 823 with 193 probes
2026-06-03 21:03:38,111 - cnv_pipe.batch.run_model.cluster823 - INFO - Child process finished cluster 823. Wrote cluster_823_samples.csv and cluster_823_params.csv
2026-06-03 21:03:38,112 - cnv_pipe.batch.run_model - INFO - Cluster 823 finished in 58.10 seconds. Status: SUCCESS