cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_AND_altera_v3_targets_postQC_hg38_AND_foresight_clarity.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:163000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.1s, sys 0.2s, output queue size 17
progress 10% @chr2:75000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.3s, sys 0.6s, output queue size 23
progress 15% @chr2:237000001, elapsed 0.1s, est remaining 0.4s, peak mem 115MB, user 0.4s, sys 1.1s, output queue size 22
progress 20% @chr3:154000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.6s, sys 1.6s, output queue size 14
progress 25% @chr4:100000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.8s, sys 1.9s, output queue size 15
progress 30% @chr5:84000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.9s, sys 2.4s, output queue size 2
progress 35% @chr6:59000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 1.1s, sys 3.0s, output queue size 13
progress 40% @chr7:59000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 1.2s, sys 3.5s, output queue size 1
progress 45% @chr8:59000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 1.3s, sys 4.0s, output queue size 13
progress 50% @chr9:77000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 1.5s, sys 4.5s, output queue size 9
progress 55% @chr10:95000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 1.7s, sys 4.9s, output queue size 27
progress 60% @chr11:125000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 1.8s, sys 5.4s, output queue size 21
progress 65% @chr13:20000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 2.1s, sys 5.7s, output queue size 15
progress 70% @chr14:65000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 2.3s, sys 6.1s, output queue size 13
progress 75% @chr16:14000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 2.5s, sys 6.5s, output queue size 5
progress 80% @chr18:1, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 2.6s, sys 7.0s, output queue size 6
progress 85% @chr20:25000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 2.9s, sys 7.3s, output queue size 15
progress 90% @chrX:40000001, elapsed 0.4s, est remaining 0.0s, peak mem 146MB, user 3.3s, sys 7.6s, output queue size 114
progress 95% @chrY:39000001, elapsed 0.4s, est remaining 0.0s, peak mem 161MB, user 3.6s, sys 8.1s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.9s, est remaining 0.0s, peak mem 184MB, user 5.3s, sys 8.7s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000a06d1
  features: 1f8bfbff fffab20b
  extended: f1bf27eb 1b407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) 6975P-C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813912
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.249 user 4.410 sys 5.729 real
done: 1 calls 0.001 user 0.000 sys 0.007 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.005 user 0.003 sys 0.902 real
idle: 73 calls 0.013 user 0.014 sys 44.050 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 193134592 mem 5.894 user 9.343 sys 2.422 real