File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/f8/47d73a3f849ec69f9157b1fb2cf3bf/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fjs_spqo because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:01:26,143 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:01:26,923 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:01:27,089 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:01:28,088 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:01:28,154 - cnv_pipe.batch.run_model - INFO - Processing cluster 461 with 182 probes
2026-06-03 21:01:28,521 - cnv_pipe.batch.run_model.cluster461 - INFO - Child process started for cluster 461 with 182 probes
2026-06-03 21:02:21,140 - cnv_pipe.batch.run_model.cluster461 - INFO - Child process finished cluster 461. Wrote cluster_461_samples.csv and cluster_461_params.csv
2026-06-03 21:02:21,141 - cnv_pipe.batch.run_model - INFO - Cluster 461 finished in 52.99 seconds. Status: SUCCESS