mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-bl3dxdgi because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:17,259 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:18,058 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:18,227 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:19,199 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:19,276 - cnv_pipe.batch.run_model - INFO - Processing cluster 1031 with 182 probes
2026-06-03 21:03:19,660 - cnv_pipe.batch.run_model.cluster1031 - INFO - Child process started for cluster 1031 with 182 probes
2026-06-03 21:04:11,553 - cnv_pipe.batch.run_model.cluster1031 - INFO - Child process finished cluster 1031. Wrote cluster_1031_samples.csv and cluster_1031_params.csv
2026-06-03 21:04:11,554 - cnv_pipe.batch.run_model - INFO - Cluster 1031 finished in 52.28 seconds. Status: SUCCESS