File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/20/e252ce0f7b5ecbd720db3409760583/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4b3mnhfc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:03:56,734 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:03:57,529 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:03:57,697 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:03:58,605 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:03:58,763 - cnv_pipe.batch.run_model - INFO - Processing cluster 1238 with 133 probes
2026-06-03 21:03:59,148 - cnv_pipe.batch.run_model.cluster1238 - INFO - Child process started for cluster 1238 with 133 probes
2026-06-03 21:04:38,445 - cnv_pipe.batch.run_model.cluster1238 - INFO - Child process finished cluster 1238. Wrote cluster_1238_samples.csv and cluster_1238_params.csv
2026-06-03 21:04:38,446 - cnv_pipe.batch.run_model - INFO - Cluster 1238 finished in 39.68 seconds. Status: SUCCESS