File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/3d/1ffd65ba7b71c45bc9e66fb3dc0f11/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-jfa095e3 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-03 21:01:23,311 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-03 21:01:24,098 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-03 21:01:24,266 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-03 21:01:25,174 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-03 21:01:25,327 - cnv_pipe.batch.run_model - INFO - Processing cluster 447 with 183 probes
2026-06-03 21:01:25,695 - cnv_pipe.batch.run_model.cluster447 - INFO - Child process started for cluster 447 with 183 probes
2026-06-03 21:02:17,653 - cnv_pipe.batch.run_model.cluster447 - INFO - Child process finished cluster 447. Wrote cluster_447_samples.csv and cluster_447_params.csv
2026-06-03 21:02:17,654 - cnv_pipe.batch.run_model - INFO - Cluster 447 finished in 52.33 seconds. Status: SUCCESS