Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/8fd9d44764f3ad347c58fdec5a77a4/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz.tbi
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/3addc8f0c39978145d931d25ba2ce6/Sig_18_tissue.recalibrated.bam
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/11/3addc8f0c39978145d931d25ba2ce6/Sig_18_tissue.recalibrated.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b3/8fd9d44764f3ad347c58fdec5a77a4/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr6_138229684-138229952.bed.gz
==> STAGING COMPLETE (10 inputs)

[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXT7YTou/chr6_138229684-138229952.bed.gz.tbi
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXT7YTou/chr6_138229684-138229952.bed.gz.tbi

Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[W::hts_idx_load2] The index file is older than the data file: /tmp/nxf.XXXXT7YTou/chr6_138229684-138229952.bed.gz.tbi
[2026-06-03T20:58:19.958774Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-03T20:58:19.959543Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-03T20:58:19.959555Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-03T20:58:19.959559Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-03T20:58:19.959563Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXT7YTou'
[2026-06-03T20:58:19.959567Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-03T20:58:19.959571Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-03T20:58:19.959575Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-03T20:58:19.959578Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] memMb: 1523736
[2026-06-03T20:58:19.959582Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-03T20:58:19.959586Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-03T20:58:19.959589Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-03T20:58:19.959593Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-03T20:58:19.959597Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-03T20:58:19.960336Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-03T20:58:19.960432Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-03T20:58:19.966124Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-03T20:58:19.966784Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-03T20:58:19.966958Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-03T20:58:19.967094Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-03T20:58:19.967280Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.967988Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.968251Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.968609Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.968789Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:19.969022Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.969113Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.969227Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.969297Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.969791Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.970993Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.971844Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-03T20:58:19.972029Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.972266Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.972576Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.972643Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.972772Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.972842Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.972959Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.973025Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.973226Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.973295Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.973418Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.973488Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.973681Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.973803Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.974336Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.974565Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.974684Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.974751Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.974863Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.974944Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975059Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975121Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975232Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975301Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975413Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975477Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975604Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.975787Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976205Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976274Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976399Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976480Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976594Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976665Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976840Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.976969Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.977088Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.977165Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.977431Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.977893Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978019Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978086Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978214Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978279Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978395Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978465Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978573Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978639Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978758Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978823Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.978951Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.979058Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.979365Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.979900Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.980474Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.980537Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.980651Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.980715Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.980838Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.980904Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.981011Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.981074Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.982658Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983281Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983411Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983483Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983596Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983660Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983773Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983835Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.983952Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.984017Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.984126Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.984196Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.984478Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985096Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985213Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985282Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985400Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985464Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985573Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985637Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985778Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985845Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.985959Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.986022Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.986343Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.987323Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.987622Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.987704Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.987834Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.987904Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.988020Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.988092Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.988349Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.989084Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.989217Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.989285Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.991548Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.992488Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.992794Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:19.992897Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.008089Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.008685Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.008952Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.009812Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.009930Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.010317Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.010402Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.010523Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.010856Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.011096Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.011666Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.012273Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.012889Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.013257Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-03T20:58:20.013724Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.014152Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-03T20:58:20.014514Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.017033Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.017763Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T20:58:20.018903Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.025671Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T20:58:20.027023Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T20:58:20.030125Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T20:58:20.030745Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T20:58:20.035505Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T20:58:20.036269Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T20:58:20.036601Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T20:58:20.100651Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.100715Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.101662Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.101935Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.106002Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T20:58:20.107255Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T20:58:20.768357Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.769605Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.772490Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T20:58:20.884030Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.885262Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:20.888556Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T20:58:21.050192Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.050277Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.051275Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.051619Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.055381Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T20:58:21.055980Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.056693Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T20:58:21.057487Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.057760Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.060763Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.061035Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T20:58:21.063922Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-03T20:58:21.092949Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.094066Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.096935Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T20:58:21.109969Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.110965Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.113430Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T20:58:21.175033Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.176360Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.179231Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T20:58:21.208473Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.209476Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.211832Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-03T20:58:21.241393Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.241461Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.242448Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.242866Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.245724Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-03T20:58:21.246621Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T20:58:21.275082Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.276180Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.278816Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-03T20:58:21.308124Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.309185Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.312195Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T20:58:21.523667Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.524725Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.528378Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T20:58:21.589619Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.590759Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.593968Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-03T20:58:21.655081Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.656249Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.659404Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T20:58:21.770529Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.770615Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.770680Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.771771Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.772135Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.773734Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.774613Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-03T20:58:21.777566Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-03T20:58:21.778276Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T20:58:21.806397Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.807677Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.808171Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.810729Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-03T20:58:21.810860Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.813863Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T20:58:21.842895Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.842970Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.843857Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.844144Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.847072Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T20:58:21.847961Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T20:58:21.908576Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.909672Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:21.912612Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T20:58:22.024064Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.025235Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.028040Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T20:58:22.139480Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.140615Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.143669Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T20:58:22.204864Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.205853Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.208669Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-03T20:58:22.237928Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.239002Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.241974Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-03T20:58:22.271491Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.272495Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.275152Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-03T20:58:22.304492Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.305401Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.308315Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T20:58:22.369335Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.370354Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.373137Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T20:58:22.434333Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.435377Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.438022Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T20:58:22.499328Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.500384Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.502898Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T20:58:22.532311Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.533292Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.535798Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-03T20:58:22.565164Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.566069Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.568361Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-03T20:58:22.598051Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.599021Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.600878Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.601700Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-03T20:58:22.602182Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.604797Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-03T20:58:22.634324Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.634403Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.635220Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.635762Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.638690Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-03T20:58:22.664270Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-03T20:58:22.668681Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.668892Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.669709Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.670002Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.673328Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-03T20:58:22.674307Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T20:58:22.702571Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.703382Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.705863Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T20:58:22.735406Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.736273Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.739129Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-03T20:58:22.768459Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.768538Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.769273Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.769540Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.772469Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-03T20:58:22.772964Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-03T20:58:22.802334Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.802424Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.803192Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.803603Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.806905Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T20:58:22.807909Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T20:58:22.918237Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.918325Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.919105Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.919539Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.922401Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-03T20:58:22.923482Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-03T20:58:22.951850Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.951944Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.952728Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.953022Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:22.956291Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T20:58:23.268572Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.269509Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.272633Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-03T20:58:23.301525Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.302344Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.305600Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T20:58:23.416579Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.417427Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.420537Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-03T20:58:23.449480Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.450271Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.453064Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T20:58:23.714736Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.715580Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.718487Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-03T20:58:23.747500Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.748279Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.751434Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T20:58:23.812460Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.813274Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.815860Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-03T20:58:23.845196Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.845955Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.848392Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T20:58:23.947955Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T20:58:23.960006Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.960099Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.960799Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.961441Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.964189Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-03T20:58:23.977910Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.978645Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.981481Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-03T20:58:23.990408Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-03T20:58:23.994427Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.994486Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.995148Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.995450Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:23.998381Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-03T20:58:23.999314Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T20:58:24.011508Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.012205Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.014805Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T20:58:24.027972Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.028591Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.031204Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-03T20:58:24.060614Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.060686Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.061354Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.061862Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.064649Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-03T20:58:24.065821Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T20:58:24.065959Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.066678Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.069406Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-03T20:58:24.098705Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.098784Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.099419Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.099654Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.102310Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T20:58:24.103658Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.104576Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T20:58:24.104720Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.107232Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-03T20:58:24.136779Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.137491Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.140230Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T20:58:24.201700Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.202422Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.205254Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T20:58:24.417076Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.417847Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.420801Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T20:58:24.532659Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.533429Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.536082Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-03T20:58:24.565583Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.566298Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.569338Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T20:58:24.680662Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.681398Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.684421Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-03T20:58:24.713528Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.714232Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.717070Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-03T20:58:24.746321Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.747012Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.749620Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T20:58:24.779488Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.780189Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.782995Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-03T20:58:24.812418Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.813094Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.815599Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-03T20:58:24.845127Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.845753Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.848680Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-03T20:58:24.877731Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.878380Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.881132Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T20:58:24.942890Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.943541Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.946591Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-03T20:58:24.975578Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.975659Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.976216Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.976549Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:24.979431Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-03T20:58:24.980537Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T20:58:25.008747Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.009353Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.012209Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-03T20:58:25.041515Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.042087Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.044814Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-03T20:58:25.074040Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.074629Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.077571Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T20:58:25.188854Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.189460Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.192415Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-03T20:58:25.221659Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.222253Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.224785Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-03T20:58:25.254305Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.254891Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.257412Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-03T20:58:25.286973Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.287549Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.290176Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T20:58:25.401931Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.402545Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.405555Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-03T20:58:25.435285Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.451257Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.451769Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.454332Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-03T20:58:25.455299Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.455761Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.458057Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-03T20:58:25.487600Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.487667Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.491282Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.491721Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.494229Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-03T20:58:25.523562Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.788141Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.788639Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.791035Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-03T20:58:25.821563Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.936025Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.936572Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.938744Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-03T20:58:25.968599Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.968674Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.969212Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-03T20:58:25.971509Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-03T20:58:26.001175Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.265909Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.266529Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.268613Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-03T20:58:26.298412Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.298704Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.298825Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.299525Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.301420Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.302079Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-03T20:58:26.304752Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-03T20:58:26.305619Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-03T20:58:26.334040Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.334116Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.334142Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.334352Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.334646Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.337261Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-03T20:58:26.338670Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-03T20:58:26.367745Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.367817Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.368005Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-03T20:58:26.370619Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-03T20:58:26.400329Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-03T20:58:30.572965Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-03T20:58:38.848065Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-03T20:58:38.848065Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] 
[2026-06-03T20:58:38.848065Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-03T20:58:38.848132Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] 
[2026-06-03T20:58:38.848139Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-03T20:58:38.848146Z] [nf-b38fd9d44764f3ad347c58fdec5a77a4-8547b-hvs8h] [603_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec